Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0296 ATGCCTTCTCATCCGAGGTCTCTTTCTTGGATTGTGGTTTCATTGGGAGGATTAGCTGTGTTTTTAATTCTTGCTTCCTGGGTTCTTGTATCTAACCACATTGGTTCCTCAGTCCATGGATATTTCTATGGTGTAGATAGTGTTGAAAAGTTTGATTTACCAGTCTCTCCAATCAATAGCACTTTTACCAATGTATCTTCTGATCTACAATCTCTGACAGTTTCCTCTAGTTATCTGTCAACTGATACAAACAGAGAACTCAATGATACCATAGCAAATTCATCAGCTCCCTTCCATGAATCTACTTCACCAAAATTTCCAAAAACCAAGGAGATAAATGGATTAGAAACTTCTGCTGCAGCTGACAGTGGTAATAATTCTACTGATGTGACAAGTAATATTGGAATTAATGAGCCTGCTTCTGTGGATTTGACAAGTACATCATCAAATGGGAACTCTACGCCTCCTGATTCCACATCAAAGTCCAGTGCAGCAGCATCTGATACACCAAAAAATGCATCCATTTTTGGTTTAGTTGATTCAGTATGTGATTTATACCATGGCAATTGGGTACATGATCCATCAGGACCATTATATACAAACAATTCATGTCCTGTATTAACTCAAATGCAGAACTGTCAGGGTAATGGAAGGCCTGACAAGGATTATGAGAACTGGAGATGGAAGCCATCTCAGTGTGACATTCCCCGATTTGATCCCAAGAAATTTTTGGAGCTAATGAGAGGGAAGACTTTGGCTTTTATCGGAGATTCAGTAGCTCGAAATCAGATGGAATCATTGTTGTGTATTCTTTGGCAGGTAGAGGTACCAAAGAACAGAGGAAACAGAAACATGCAGAGATATTATTTCAGGTCCACATCTGTAATGATAGTTCGGATATGGTCCTCTTGGCTTGTGAAAGTCACAAATGAGCCATTTGATTTCGCTCCAGCCGGGGTGGACAAGCTGCATCTCGATGCCCCTGATGAAAAGCTCATGAACTTCATCCCAACCTTCGATGTAGTTGTCATTTCTTCTGGCCATTGGTTTGCAAAACAGTCTGTGTACATTCTGAACAATGAGATAGTAGGAGGACAGTTATGGTGGCCAGATAAGTCCAGACAAATGAAGGTTAATAACATAGAAGCATATGGGATATCTGTTGAAACAATCCTCAGTGCTCTTGTTAATGATCCAAATTACACTGGGCTTACCATTTTGCGCTCATATTCACCAGATCATTATGAGGGTGGGGCTTGGAATACTGGAGGATCATGCACTGGGAAACTTCAGCCTCTTGCTGCTGCTGAAATGGTGAAAAATGGCTATACTGATACAATGCATGAGAAACAAGTTAATGGTTTTAATCTTGCAATAAAGAAAGCAAGGAATAGATCAAAGTTGATATTGATGGATATCACTTATGCCTTTCAGTATCGCCATGATGGTCATCCGGGTCCATATAGGAGCCCCGACCCAAATAAGATTACAAAACGAGGACCCGATGGAAGGGCCCCACCACAAGATTGCTTGCACTGGTGTATGCCTGGTCCTGTAGATACTTGGAATGAAATTGTGCTTGAAATAATTGAGAGAGAATATAACAGTGGAAGAATCTTGTTTCCGAGGAATGTGACGGAAACAGGAACAGCGAGCTTTCCTTATCTAGGACCGAGACATTCAAAGCTCAATTTAGATATAACCTTGTTCAAGTTAGTTTCCAATTGTTCAAGCAACTGTATATCCGTGGTCGTCGATGATCATCTTTCATTTTCGCATTCTGTGTTGACATTTCAATTTTTAACACGATGGTTCCTCTGCTTTGATCTTTTCAATGCTTCAACCTTTAAAATAGCTTGTTTTTGCAGAAATAAGTGCTCCGAAATGTATATACCCCAATTTGATCCTTTTCTGCAGACTGAAACAACATGCGGATCACTTCTTTATGAGCTTAAGAACATTTGGGATGAACTTGGGGTGTCTAAGACTGAAAGAGATAAAACATTACTTGAGATCGAACAAGAGTGTCTACATGTCTACAGAAAAAAAGTAGATCAGGCAAATCAGTCTAGAGCTCAGTTAAGGCAGGAAATTGCTGATTCTGAAGCAGAACTTTCAGCCATCTGTACAGCAATGGGAGAGCGACCTGTACATGTCAGACAGTCTGATAAAAAAGCTGGAAGCTTGAAGAAAGAGCTTGAAATTATTCTTCCAGGGCTGGAGGAGATGCGGAAAAGGAGGTCTGACCGAAGAAATCAACTTACTGAAGTCCAAGAGCAGATACAAGGTATATCTAATGAGATCTATGGGCCCAAAGAATCTGCTCTTGTCAAAAATGTTGTAGAGGAATCTGATCTAACCTTGATAAAGCTTGAAGAATTGCACAGACAGCTGCATACACTTCAAAAAGAAAAGAGTGAACGTCTCAAGAAGGTCCAAGACCAATTAAGTACATTAAAATCTTTAACTTCAGTGCTTGGTTTGGACTTCAAACAGACCCTCTGCGACCTTCATCCTAGTTTAGGGGATTCTGAACAATCTAAGAGTGTGAGTAACGATACAATCCGGCAACTAGATGCTGCTATGCAAAAACTGCGAGAAGTTAAATTACAAAGAATGCAGAAGCTCCAAGATCTTGCAACGACTATGTTGGAGCTCTGGAACTTGATGGATACACCAGTCGAAGAGCAACAGAAGTTTCAGAATGTTACATGTAACATAGCTGCTTCAGAACATGAAATGACTGATCCTAACAACTTGTCTATGGACTTCATTCATTATGTGAAGGCAGAAGTAACTAGGCTGGAAGAAATAAAAGCAAGCAAAATGAAAGAGCTTGTGTTGAGGAAGAGAACAGAGCTAGAGGAGATTTGTCAAAAGACACATTTAGTTTCAGAAGTAGACAGTGCAATCGAATGTGTTATTGAAGCTATAGAGTCAGGATCTGTAGCCCCAACTTGTGTGCTTGAGCAAATTGAGCTTCAGATAGCCAAAGTAAAAGAGGAAGCTTTTAGCCGAAAAGAAATACTTGAGAAGGTTGAGAAATGGCTGTCAGCCCGTGATGAGGAGACTTGGTTGGAGGAATATAACAGAGATGAGAATCGATATAATGCTGGCAAAGGAACTCATCTTATTCTCAAGCGAGCTGAGAAAACCCGTGCCTTGGTCAATAAAATGCCAGCAATGGTGGAGGCCTTGACTTCAAAAACCACCGCATGGGAAAAGGAAAGAGGAATTGAGTTCACATATGATGGTATCTCTCTGCTTTCTATGCTTGAAGAGTACAATGCACTACGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAACGGGATCTGAGGAGACTTCAGGGACAAATGATAGCAGAACAAGAAGTAAGATATGGGTCAAAACCAAGTTCATCAAGGCCTCAAACTCCAAGAAAGGCACATAGGACGTCCTCTGGAGGTGCAACTAATAAAGGACATGGAGGATCAACGCTTCAAACTAAAGGTAGTGAGTCACGTTTAACGAGGAAGACCGACAATGCACACCAAAGTGATGAATATAATCATTTGGATGATGGCAATTCTTCTTTATCATCAGCAAGAAGGTGCGATGTTGCCGGTGGTGTCACTGGAAAAAAGCATTCACCTCGTGACATAAAATCTCCTATGACGAGACAGCCTTTTTGTCCTATATCTTCAACAACGTTATCATCAAGAGCAAACATAGCAGATGAATTGAGCATACAGAGCGAAAAGTTGCAGAAAGCTATGGCACTAAAGAATGTGTCAATATTCACTACTCCCTCCAAGATAGCAACAACAATGATAGAAGATGACGAAGAGAATAAAACTCCGAAGGTATTGCCTATCCCTATCCCAACTACACCGTTGTCGGTAGAGAAACTGTCAAGTCAATTGTAA 3906 0.4073 MPSHPRSLSWIVVSLGGLAVFLILASWVLVSNHIGSSVHGYFYGVDSVEKFDLPVSPINSTFTNVSSDLQSLTVSSSYLSTDTNRELNDTIANSSAPFHESTSPKFPKTKEINGLETSAAADSGNNSTDVTSNIGINEPASVDLTSTSSNGNSTPPDSTSKSSAAASDTPKNASIFGLVDSVCDLYHGNWVHDPSGPLYTNNSCPVLTQMQNCQGNGRPDKDYENWRWKPSQCDIPRFDPKKFLELMRGKTLAFIGDSVARNQMESLLCILWQVEVPKNRGNRNMQRYYFRSTSVMIVRIWSSWLVKVTNEPFDFAPAGVDKLHLDAPDEKLMNFIPTFDVVVISSGHWFAKQSVYILNNEIVGGQLWWPDKSRQMKVNNIEAYGISVETILSALVNDPNYTGLTILRSYSPDHYEGGAWNTGGSCTGKLQPLAAAEMVKNGYTDTMHEKQVNGFNLAIKKARNRSKLILMDITYAFQYRHDGHPGPYRSPDPNKITKRGPDGRAPPQDCLHWCMPGPVDTWNEIVLEIIEREYNSGRILFPRNVTETGTASFPYLGPRHSKLNLDITLFKLVSNCSSNCISVVVDDHLSFSHSVLTFQFLTRWFLCFDLFNASTFKIACFCRNKCSEMYIPQFDPFLQTETTCGSLLYELKNIWDELGVSKTERDKTLLEIEQECLHVYRKKVDQANQSRAQLRQEIADSEAELSAICTAMGERPVHVRQSDKKAGSLKKELEIILPGLEEMRKRRSDRRNQLTEVQEQIQGISNEIYGPKESALVKNVVEESDLTLIKLEELHRQLHTLQKEKSERLKKVQDQLSTLKSLTSVLGLDFKQTLCDLHPSLGDSEQSKSVSNDTIRQLDAAMQKLREVKLQRMQKLQDLATTMLELWNLMDTPVEEQQKFQNVTCNIAASEHEMTDPNNLSMDFIHYVKAEVTRLEEIKASKMKELVLRKRTELEEICQKTHLVSEVDSAIECVIEAIESGSVAPTCVLEQIELQIAKVKEEAFSRKEILEKVEKWLSARDEETWLEEYNRDENRYNAGKGTHLILKRAEKTRALVNKMPAMVEALTSKTTAWEKERGIEFTYDGISLLSMLEEYNALRQEKEQERRRQRDLRRLQGQMIAEQEVRYGSKPSSSRPQTPRKAHRTSSGGATNKGHGGSTLQTKGSESRLTRKTDNAHQSDEYNHLDDGNSSLSSARRCDVAGGVTGKKHSPRDIKSPMTRQPFCPISSTTLSSRANIADELSIQSEKLQKAMALKNVSIFTTPSKIATTMIEDDEENKTPKVLPIPIPTTPLSVEKLSSQL 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0296 1301 Coils Coil 677 704 - -
Lele46g0296 1301 MobiDBLite consensus disorder prediction 117 168 - -
Lele46g0296 1301 MobiDBLite consensus disorder prediction 1127 1166 - -
Lele46g0296 1301 Coils Coil 1088 1118 - -
Lele46g0296 1301 MobiDBLite consensus disorder prediction 1167 1184 - -
Lele46g0296 1301 FunFam 65-kDa microtubule-associated protein 6 996 1129 - -
Lele46g0296 1301 MobiDBLite consensus disorder prediction 484 504 - -
Lele46g0296 1301 Coils Coil 791 811 - -
Lele46g0296 1301 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 235 528 IPR026057 GO:0016740
Lele46g0296 1301 Coils Coil 740 760 - -
Lele46g0296 1301 Pfam Microtubule associated protein (MAP65/ASE1 family) 646 1142 - -
Lele46g0296 1301 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 639 1173 IPR007145 GO:0000226|GO:0008017
Lele46g0296 1301 MobiDBLite consensus disorder prediction 1104 1221 - -
Lele46g0296 1301 Gene3D - 995 1129 - -
Lele46g0296 1301 Pfam PMR5 N terminal Domain 182 234 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0296 Lele-ChrLele46 1948425 1965969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0296 639 1148 EF-hand Containing Proteins AT5G62250 57.143 1.14e-168 511
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0296 46 1948425 1965969 Lele05g2017 05 14384678 14387110 CCT
Lele46g0296 46 1948425 1965969 Lele06g1855 06 13039770 13042202 CCT
Lele46g0296 46 1948425 1965969 Lele07g2060 07 13845512 13847944 CCT
Lele46g0296 46 1948425 1965969 Lele08g1855 08 12903846 12906278 CCT
Lele45g0272 45 2220167 2227225 Lele46g0296 46 1948425 1965969 ECH
Lele46g0296 46 1948425 1965969 Lele46g0296 46 1948425 1965969 ECH
Lele46g0296 46 1948425 1965969 Lele47g1113 47 16756564 16769745 hybridization