Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1113 ATGTCTATACCCGAAATTGATCCTTTTCTACGGTCTGAAACAACATGCGGATCACTGCTTTATGAGCTTAAGAACCTTTGGGATGAAGTTGGGGTGTCTGAGACTGAAAGAGATAAAAAATTATTTGAGATCGAACAAGAGTGTCTACATGTGTACAGAAGAAAAGTAGATCAGGCAAATCAGTCTAGAGCTCAGCTAAGGCAGGAAATTGCTGATTCTGAAGCAGAACTTTCAGCCGTCTGTTCAGCAATGGGAGAGCGACCTGTACATGTCAGACAGCCTGATAAAAAAGCTGGAAGCTTGAAGGAAGAGCTTGAAATTATTCTTCCAGAGCTGGAGGAGATGCGGAAAAGGAGGGCTGACCGAAGAAATCAATTTATCGAAGTCCAAGAGCAGATACAAGGTATATCTATTGAGATCTATGGGCCCAAAGAATCTGCTCCTGTCAAAAATGTTGAAGAGGAATCTGATCTAACATTGAGAAAGCTTGAAGAATTGCACAGACAGCTGCATACACTTCAAAAAGAAAAGAGTGAACGTCTCAAGAAGGTCCAAGACCAATTAGATACATTAAAATCTTTAACTTCAGTGCTTGGTTTGGACTTCAAACGGACACTCTGCGACCTTAATCCTAGTTTAGGGGATTCTGAACAATCTAAGAGTGTGAGTAATGATTCAATCCGGCAACTAGATGCTGCTACACAAAAGCTGCGAGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACGACTATGTTGGAGCTCTGGAACTTGATGGATACACCAGTCGAAGAGCAACAGAAGTTTCAGAATGTTACTTGTAACATAGCTGCTTCAGAAAATGAAATAATTGAGCCTAACAGCTTGTCTATGGACTTTATTCATTATGTTGAGGCAGAAGTAACTAGGCTGGAAGAGATAAAAGCAAGCAAAATGAAAGAGCTTGTGTTGAGGAAGAGAACAGAGCTAGAGGAGATTTGTCAAAAGACACATTTGGTTTCAGAAGCAGACAGTGCAATCGAATGTGTTATAGAAGCTATAGAGTCAGGATCTGTAGACCCAGCTTGTGTGCTTGAGCAAATTGAGCTTCAGATTGCCAAAGTAAAAGAGGAAGCTTTTAGCCGAAAAGAAATACTTGAGAAGGTTGAGAAATGGCTGGCAGCACGTGATGAGGAGACTTGGTTGGAGGAATATAACAGAGATGAGAATCGATATAATGCTGGCAAAGGAACTCATCTTATTCTCAAGCGAGCTGAGAAAGCCCGTGCCTTGGTTAATAAAATGCCAGCAATGGTGGAGGCCTTGACTTCAAAAACCATCGCATGGGAAAAGGAAAGAGGAATTGAGTTCACGTATGATGGTATCTCTCTGCTTTCTATGCTTGAAGAGTACAATACACTACGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAACGGGATCTGAGGAGACTTCAGGGACAAATGATAGCAGAACAGGAAGCAAGATATGGGTCAAAACTAAGTTCATCGAAGCCTCAAACTCCAAGAAAGGCACATAGGACGTCCTCTGGAGGTACAACTAATAAAGGACATGGCGGAGCAACACTTCAAACTAAAGGTACTGAGTCACGTTTAACGAGGAAGACCGACAATGCACACCAAAGTGATGAATATAATCATTTGGACGATGGCAATTCTTCTTTATCATCAGCAAGAAGGTACGATGTTGCCCGTGGTGTCACTGGAAAAAGGCATTCACTTCGTGACATAAAATCTCCTATGATGAGACAACCTTTTTGTCCTATATCGTCAACAAAGGTGTCATCAAGAGCAGACATGGAAGATGAATTGAGCATACACAGCGAAAAGTTGCAGAAAGCCATGGCACTAAAATATTTGCCAATATTCACTACTCCCTCCAAGATAGCATCAACAATGATAGAAGATGATGAAGAGAATAAAACTCCAAAGGTATTGCCTATCCCTATCCCTTCTACACCTTCATCAGTAGTTTCAGTTTCTATGAAAATGGCTATGACTCCATTTGGCTGTGACTCGGTGGTTCAAGGGATTGAATACTCTTTTGAGGAAAGAAGAGCTGGATCAATGAAAAGTTTATCATGTGATGAAAGTGATTGTTTCTGCAATGGTGGATATTTGAGCTTCAGCACTGTGTTTTTGTGGCAGAAGAAGTTCAAGTTCAGCTTCTGCGATTGTACTGCTAGATTTTTCGTCTGTTTTATCATTTCAGAGAAAAAGGTCGAGTTGTTGAAGTTTTCTTTCACCGGCGGGACCGAAGCGGCCGCTCCGGCACCTGTAAGTGCTCCAGCGACGGTGACTCCAGGCACGGATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGCTCCCGATGGCTCAATGGCGTTGGCGTTGTCTCCGATGCCGATTTCGTCTTCAATTCCGTTGACTGGTGACTTCTCCGGTTGGAAGCGGGGCAGAGGGCGGTATGTTGAATCGACGAAGAAGTCGTTTAATAAGCATGAGTTCGAAAGTTCAGGACAAGGTAATGGACTTGCATACTCAGTTGGTGCCAATTTTACACCCCATATACTCACAGTTAATGCTGGCGAGGATGTCACCATGAAGGTTATGTCTTTCTCTCAACAAGGATCCCGTGCCATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAGCACTTCGACAACCGACTTCCTCTGGTGGTACTTTAACTTATGAGGGACGATTTGAGATTCTTTCTTTGTCGGGTTCCTTTATGCCAACTGAGAATGGAGTGACAAGGAGCAGAACTGGTGGAATGAGCGTGTCTTTGGCAGGGCCAGATGGTCGAGTGGTTGGGGGTGGACTCGCTGGTCTGTTAGTTGCTGCAGGCCCTGTGCAGGTTGTGGTGGGTAGTTTCCTTCCAGGTCACCAGCAGGAACACAAACACAAGAAGCAGAAGGTGGATTACATATCTATGGTAACGCCTCCCCTTTTTAGTCCCTCTCCTGTTTCTGATCAAGAATTGCATGTTAGTTTTGGAGGAGTAAAGCCTAGTCCAACACCTGCTTTTCAAAGAGACAATGCTGCTTGTTTTAACAATGTCCATAAGACCGGGGATAGATCGCCCTTACCCGAGAAGGAATCTTATACCGGCCTATCAAATGCTGGGATTCCTGCTTAA 3177 0.4341 MSIPEIDPFLRSETTCGSLLYELKNLWDEVGVSETERDKKLFEIEQECLHVYRRKVDQANQSRAQLRQEIADSEAELSAVCSAMGERPVHVRQPDKKAGSLKEELEIILPELEEMRKRRADRRNQFIEVQEQIQGISIEIYGPKESAPVKNVEEESDLTLRKLEELHRQLHTLQKEKSERLKKVQDQLDTLKSLTSVLGLDFKRTLCDLNPSLGDSEQSKSVSNDSIRQLDAATQKLREVKLQRMQKLQDLATTMLELWNLMDTPVEEQQKFQNVTCNIAASENEIIEPNSLSMDFIHYVEAEVTRLEEIKASKMKELVLRKRTELEEICQKTHLVSEADSAIECVIEAIESGSVDPACVLEQIELQIAKVKEEAFSRKEILEKVEKWLAARDEETWLEEYNRDENRYNAGKGTHLILKRAEKARALVNKMPAMVEALTSKTIAWEKERGIEFTYDGISLLSMLEEYNTLRQEKEQERRRQRDLRRLQGQMIAEQEARYGSKLSSSKPQTPRKAHRTSSGGTTNKGHGGATLQTKGTESRLTRKTDNAHQSDEYNHLDDGNSSLSSARRYDVARGVTGKRHSLRDIKSPMMRQPFCPISSTKVSSRADMEDELSIHSEKLQKAMALKYLPIFTTPSKIASTMIEDDEENKTPKVLPIPIPSTPSSVVSVSMKMAMTPFGCDSVVQGIEYSFEERRAGSMKSLSCDESDCFCNGGYLSFSTVFLWQKKFKFSFCDCTARFFVCFIISEKKVELLKFSFTGGTEAAAPAPVSAPATVTPGTDVKKKRGRPRKYAPDGSMALALSPMPISSSIPLTGDFSGWKRGRGRYVESTKKSFNKHEFESSGQGNGLAYSVGANFTPHILTVNAGEDVTMKVMSFSQQGSRAICILSANGMISNVALRQPTSSGGTLTYEGRFEILSLSGSFMPTENGVTRSRTGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKHKKQKVDYISMVTPPLFSPSPVSDQELHVSFGGVKPSPTPAFQRDNAACFNNVHKTGDRSPLPEKESYTGLSNAGIPA 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1113 1058 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 542 IPR007145 GO:0000226|GO:0008017
Lele47g1113 1058 Coils Coil 49 76 - -
Lele47g1113 1058 CDD DUF296 857 971 IPR005175 -
Lele47g1113 1058 Coils Coil 460 490 - -
Lele47g1113 1058 MobiDBLite consensus disorder prediction 539 556 - -
Lele47g1113 1058 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Lele47g1113 1058 Pfam Plants and Prokaryotes Conserved (PCC) domain 858 971 IPR005175 -
Lele47g1113 1058 MobiDBLite consensus disorder prediction 499 538 - -
Lele47g1113 1058 ProSiteProfiles PPC domain profile profile. 853 994 IPR005175 -
Lele47g1113 1058 MobiDBLite consensus disorder prediction 492 576 - -
Lele47g1113 1058 Gene3D - 367 501 - -
Lele47g1113 1058 FunFam AT-hook motif nuclear-localized protein 1-like 858 988 - -
Lele47g1113 1058 Gene3D - 858 991 - -
Lele47g1113 1058 MobiDBLite consensus disorder prediction 1035 1058 - -
Lele47g1113 1058 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 514 - -
Lele47g1113 1058 Coils Coil 112 132 - -
Lele47g1113 1058 SUPERFAMILY AF0104/ALDC/Ptd012-like 855 983 - -
Lele47g1113 1058 Coils Coil 606 626 - -
Lele47g1113 1058 Coils Coil 149 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1113 Lele-ChrLele47 16756564 16769745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1113 13 520 EF-hand Containing Proteins AT5G62250 57.752 9.63e-174 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1113 47 16756564 16769745 Lele47g1113 47 16756564 16769745 ECH
Lele45g0272 45 2220167 2227225 Lele47g1113 47 16756564 16769745 hybridization
Lele46g0296 46 1948425 1965969 Lele47g1113 47 16756564 16769745 hybridization