Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1855 ATGCAAGAAAACGAAAGCCACACCCACCAACATGGTTCGAGTACTACTAGCTCGACTCCCGACGGGAGCCCCGTTTTGACGTTGAATCTTAGAGAGCGTGAAGAGCCTATTTTCTACGCCAGTTTGGACCCGCTTTGCCCGATGGCTTCAACTACTTCCACATCCACCGAGCCGCTTCCTTCCATCGACGATGTAGCCGTCAAGGCGGTGAACAAACGGTACGAAGGATTGGTCACTGTGCGAACTAAAGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCGCATTTTGAACCCGTTCTGATTCGGAATCCTGATACCGGAGTTCCAAAATCCGTGAAGCTGAAATGCTCTTTGTGTGACTCTGTGTTCTCGGCCTCGAACCCATCGAGAACTGCTTCGGAGCATTTGAAGAGGGGTACATGCCCCAATTTCAGCTCTGGTTTGAGGCCCAATTCGTCGCTCTCTCCGGTGCCGATATCTTCGGTGGCTTTGCCTGCTTCCAACAATCACAAGAAGAGAAGCTCTCCTCAAACGGCTCCGACTTCTCCTCCTTCAAGTTATCAAAATCATTCCTTGGCAATGGTCGAGTCCTCTCGGTTTTACGGCGAATTGAGTTATTCACAGGTGCAGAACTCAGTTGGGATAAATCAGCAGCATTTGGTTCTTTCTGGTGGGAAGGAGGATTTGAGTGCTTTGGCCATGTTTGAAGATAGTGTGAAAAAACTCAAGAGTCCTAAGGCCTCACCAGGTCCTGTTTTAAGCAAGGAACATATTAACTCTGCTATGGAGTTGCTCGCGGATTGGTTCTACGAATCATGTGGGTCTGTGTCGTTCTCAGCTCTTGAGCAGACCAAATTTCAAGCCTTCCTCAGCCAGGTGGGTTTGCCGACAACAACTCTGCGACGTGAAATCTCGGGTTCTCGACTTGATGCTAGGTACAATGAGGTCAAAGCCGAGTCAGAAGCCAAAATAAGAGATGCTATGTTTTTTCAGTTATCTAGTGATGGCTGGAAGAACGAGAACTGGTACAGCTTATGTTGTGGGGGAGAGAATTTGGTGAAGTTTACTGTTAATCTTCCAAATGGGACTAGTGTGTTTCAAAAGGCCGTGTTCACTGCGGGAGTAACGTCCTCCAAGTATGCGGAGGAGCTTTTATGGGAAACAGTCGCAGGTGTAAGTGGAAATGTTGTGCAGAGATGTGTGGGAATTGTAGCAGACAAATATAAGGCCAAGGCGTTGAGGAACTTGGAGTTTCAGAATCATTGGATGGTAAATATTTATTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTCCCACTTTTCAGGGTTGTGACTGAGAATTCCCTAAAAGTTGCAAATTATATAAACAATGAATCTCCGGTTAGGAACATTTTTCTCAAGTACCGGATGCAGGAGCTTGAATACACTGGGTTGCTTCGAGTTCCATCGCCCAAATGTGATTATTTGAATAACTTCGCATCTGTCTTTCCAATGTTGGAGGACATAGTGGGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGATGACTCGTTTAAATTAACATGCATGGAGGATCCACAAGCGAGAGAAGTTGCTGCAATTGTTCAGAGTGAGGAATTCTGGAATGAATTGGAGGCAGTTTATTCTCTTGTAAAGCTTATCAAAGCAATGGTTCAAGATATTGAAGCTGAGAGGCCACTGATTGGTCGATGCCTGCCTCTCTGGGAGGAAACAAGGACCAAAGTGAAGGAGTGGTGTGCAAAATACAATGTGGCAGAAGGACTTGTGGAGAAAATACTTGAGAAACGATTCAGAAAGAATTACCACCCTGCTTGGTCAGCTGCATTCATACTCGACCCACTTTATTTGATCAAAGACACTAGTGGGAAATACCTTCCTCCATTCAAATGCTTGACTCGTGAACAAGAAAAAGATGTAGATAAGTTACTAACAAGGCTAGCTTCAAGAGAAGATGCTCATGTTGTGTTGATGGAGCTCATGAAATGGAGGTCAGAAGGGCTCGACCCACTTTATGCACAGGCAGTTCAGATGAAACAAAAGGACCCTGTCACTGGGAAGATGAAAGTAGCCAACCCACTGAGCAGTAGACTTGTGTGGGAAACTTGCCTTAGTGAGTTCAAGTCTCTAGGGAAGATTGCTGTAAGGCTTATTTTTCTGCATGCAACCTCATGTGCGTTCAAGAGTAATTGGTCTTTCATGAGAAAAGTTTCTGCAAATAAGCACTGCCTAGTTGGATTGGAGAGAGTTCAGAAGATGATATACATTGCTTCTCATGCCAAGCTTGAAAGGAGAGACATTTCTAGTGAGGAAGAAAAGGATGCAGAACTCTTTGCCATGTCGGGTAGTGAGGATGGAATGCTGGCGGAGGTCTTAGCTGACGCACCCTTAGTGTAA 2433 0.4542 MQENESHTHQHGSSTTSSTPDGSPVLTLNLREREEPIFYASLDPLCPMASTTSTSTEPLPSIDDVAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHFEPVLIRNPDTGVPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSLSPVPISSVALPASNNHKKRSSPQTAPTSPPSSYQNHSLAMVESSRFYGELSYSQVQNSVGINQQHLVLSGGKEDLSALAMFEDSVKKLKSPKASPGPVLSKEHINSAMELLADWFYESCGSVSFSALEQTKFQAFLSQVGLPTTTLRREISGSRLDARYNEVKAESEAKIRDAMFFQLSSDGWKNENWYSLCCGGENLVKFTVNLPNGTSVFQKAVFTAGVTSSKYAEELLWETVAGVSGNVVQRCVGIVADKYKAKALRNLEFQNHWMVNIYCQLQGFISLIKDFNKELPLFRVVTENSLKVANYINNESPVRNIFLKYRMQELEYTGLLRVPSPKCDYLNNFASVFPMLEDIVGCARVIQMVMLDDSFKLTCMEDPQAREVAAIVQSEEFWNELEAVYSLVKLIKAMVQDIEAERPLIGRCLPLWEETRTKVKEWCAKYNVAEGLVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREDAHVVLMELMKWRSEGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCAFKSNWSFMRKVSANKHCLVGLERVQKMIYIASHAKLERRDISSEEEKDAELFAMSGSEDGMLAEVLADAPLV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1855 810 MobiDBLite consensus disorder prediction 7 25 - -
Lele06g1855 810 MobiDBLite consensus disorder prediction 127 189 - -
Lele06g1855 810 PANTHER OSJNBA0013A04.12 PROTEIN 70 776 - -
Lele06g1855 810 MobiDBLite consensus disorder prediction 1 25 - -
Lele06g1855 810 SUPERFAMILY Ribonuclease H-like 398 776 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1855 Lele-ChrLele06 13039770 13042202 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1116 47 16788168 16790691 Lele06g1855 06 13039770 13042202 CCT
Lele48g1179 48 16311057 16313506 Lele06g1855 06 13039770 13042202 CCT
Lele45g0272 45 2220167 2227225 Lele06g1855 06 13039770 13042202 CCT
Lele46g0296 46 1948425 1965969 Lele06g1855 06 13039770 13042202 CCT
Lele06g1855 06 13039770 13042202 Lele07g2060 07 13845512 13847944 hybridization
Lele06g1855 06 13039770 13042202 Lele08g1855 08 12903846 12906278 hybridization