Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2017 ATGCAAGAAAACGAAAGCCACACCCACTATCATGGTTCGAGTACTACTAGCTCGACTCCCGACGGGAGCCCCGTTTTGACGTTGAATCTTAGAGAGCGTGAAGAGCCTGTTTTCTACGCCGGTTTGGACCCGCTTTGCCCAATGGCTTCAACGACTTCCACATCTACCGAGCCTCTTCCTTCCATCGACGATATAGCCGTCAAGGCGGTGAACAAACGGTACGAAGGATTGGTCACTGTGCGAACTAGAGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCGCATTTGGAACCCTTTCTGATTCGAAATCCCGATACCGGAGTTCCAAAATCCGTGAAGCTGAAATGCTCTTTGTGTGACTCTGTGTTCTCGGCCTCGAACCCATCGAGAACTGCTTCAGAGCACTTGAAGAGGGGTACGTGCCCCAATTTCAGCTCTGGTTTGAGGCCCAATTCTTCTTTCTCACCGATGCCGATATCTTCGGTGGCTTTGCCTGCTTCCAACAATCACAAGAAGAGATGCTCTCGTCAAACGGTTCCGACTTCTCCTCCTTCAAGTTATCAAAATCATGCCTTGGCAATGGTCGAGTCCTCTCGGTTTTACGGCGAATTGAGTTATTCACAGGTGCAGAACTCAGTTGGGATAAATCAGCAGCATTTGGTGCTTTCTGGTGGGAAGGAGGATTTGAGTGCATTGGCTATGTTTGAAGATAGTGTGAAAAAACTCAAGAGTCCTAAGGCCTCACCAGGTCCTGTTTTAAGCAAGGAACAGATTAACTCTGCTAAGGAGTTACTCGGGGATTGGTTCTACGAATCATGTGGGTCTGTGTCATTCTCAGCACTTGAGCAGACCAAATTTCAAGCCTTCCTCAGCCAGGTGGGTTTGCCGACAACAACTCTGCGACGTGAAATCTCCGGTCCTCGACTTGATGCTAGGTACAATGAGGTCAAAGCCGAGTCAGAAGCCAAAATAAGAGATGCGATGTTTTTTCAATTATCTAGTGATGGCTGGAAGAACGAGAACAGGTACAGCTTGTATTGTGGGGGAGAGAATTTGGTGAAGTTTACTGTTAATCTTCCAAATGGTACTAGTGTGTTTCAAAAGGCAGTGTTTACTGGAGGAGTCACTTCGTCCAAGTATGCGGAGGAGCTTTTATGGGAAACAGTCGCAGTTGTAAGTGGAAATGTTGTGCCGAGATGTGTGGGAATTGTAGCAGACAAATATAAGGCCAATGCGTTGAGGAACTTGGAGTTTCAGAATCATTGGATGGTAAATATTTATTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTCCCACTTTTCAGGGTTGTGACTGAGAATTGCTTTAAAGTTGCAAATTATATAAACAATGAATCTCCGGTTAGGCACATTTTTCTCAAGTACCGGATGCAGGAGCTTGAATACACTGGGTTGCTTCGAGTTCCATCGCCCAAATGTGATCATTTGAATAACTTTGGATCTGCCTTTCCAATGTTGGAGGACACATTGGGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAAGACTCATTTAAAGTAACATGCATTGAGGATCCACAAGCGAGAGAAGTTGCTGCAATTGTTCAGAGTGAGGGATTCTGGAATGAATTGGAGGCAGTTTATTCTCTTGTAAAGCTTATCAAAGCAATGGTTCAAGATATTGAGGCTGAAAGGCCACTGATTGGTCGATGCCTGCCTCTCTGGGAGGAAACAAGGACCAAAGTGAAGGAGTGGTGTGCAAAATACAATGTTGCAGAAGGACCTGTGGTTAAAATACTTGAAAAACGATTCAGAAAGAACTACCACCCTGCTTGGTCAGCTGCATTTATACTCGACCCACTTTACTTGATCAAAGACACTAGTGGTAAATACCTTCCTCCATTCAAATGCTTGACGCGTGAACAAGGCAAAGATGTAGATAAGTTACTAACAAGGCTAGCTTCTAGAGATGATGCTCATGTTGTGTTGATGGAGCTCATGAAATGGAGGTCAGAAGGGCTCGACCCACTTTATGCACAGGCAGTTCAGATGAAACAAAAGGACCCTGTGACTGGGAAAATGAAAGTAGCCAACCCACTGAGCAGTAGACTTGTGTGGGAAACTTGCCTAAGTGAGTTCAAGTCTCTAGGGAAGATTGCTGTAAGGCTTATTTTTCTGCATGCAACCTCATGTGCTTTCAAGAGTAATTGGTCTTTCATGAGAAAAGTTACTGCAAATAAGCACTCCCGAGTTGGATTGGAGAGAGTTCAGAAGATGATATACATTGCTGCTCATGCCAAGCTTGAAAGGAGAGACATTTCTAGTGAGGAAGAAAAGGATGCAGAACTCTTTGCCATGTCGGGTAGAGAGGATGGAATGCTGGCTGAGGTCTTTGCTGAGGCACCCTTAGTGTAA 2433 0.4509 MQENESHTHYHGSSTTSSTPDGSPVLTLNLREREEPVFYAGLDPLCPMASTTSTSTEPLPSIDDIAVKAVNKRYEGLVTVRTRAIKGKGAWYWAHLEPFLIRNPDTGVPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSFSPMPISSVALPASNNHKKRCSRQTVPTSPPSSYQNHALAMVESSRFYGELSYSQVQNSVGINQQHLVLSGGKEDLSALAMFEDSVKKLKSPKASPGPVLSKEQINSAKELLGDWFYESCGSVSFSALEQTKFQAFLSQVGLPTTTLRREISGPRLDARYNEVKAESEAKIRDAMFFQLSSDGWKNENRYSLYCGGENLVKFTVNLPNGTSVFQKAVFTGGVTSSKYAEELLWETVAVVSGNVVPRCVGIVADKYKANALRNLEFQNHWMVNIYCQLQGFISLIKDFNKELPLFRVVTENCFKVANYINNESPVRHIFLKYRMQELEYTGLLRVPSPKCDHLNNFGSAFPMLEDTLGCARVIQMVMLEDSFKVTCIEDPQAREVAAIVQSEGFWNELEAVYSLVKLIKAMVQDIEAERPLIGRCLPLWEETRTKVKEWCAKYNVAEGPVVKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQGKDVDKLLTRLASRDDAHVVLMELMKWRSEGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCAFKSNWSFMRKVTANKHSRVGLERVQKMIYIAAHAKLERRDISSEEEKDAELFAMSGREDGMLAEVFAEAPLV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2017 810 MobiDBLite consensus disorder prediction 7 25 - -
Lele05g2017 810 SUPERFAMILY Ribonuclease H-like 399 775 IPR012337 -
Lele05g2017 810 PANTHER OSJNBA0013A04.12 PROTEIN 70 776 - -
Lele05g2017 810 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2017 Lele-ChrLele05 14384678 14387110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1116 47 16788168 16790691 Lele05g2017 05 14384678 14387110 CCT
Lele48g1179 48 16311057 16313506 Lele05g2017 05 14384678 14387110 CCT
Lele45g0272 45 2220167 2227225 Lele05g2017 05 14384678 14387110 CCT
Lele46g0296 46 1948425 1965969 Lele05g2017 05 14384678 14387110 CCT
Lele05g2017 05 14384678 14387110 Lele07g2060 07 13845512 13847944 hybridization
Lele05g2017 05 14384678 14387110 Lele08g1855 08 12903846 12906278 hybridization