Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0272 ATGTCTATACCCGAAATTGATCCTTTTTTACGGGCTGAAACAACATGCGGATCACTGCTTTATGAGCTTAAGAACCTTTGGGATGAAGTTGGGGTGTCTGAGACTGAAAGAGATAAAACATTATTTGAGATCGAACAAGAGTGCCTACATGTGTACAGAAGAAAAGTAGATCAGGCAAATCAGTCTAGAGTTCAGCTAAGGCAGGAAATTGCTGATTCTGAAGCAGAACTTTCAGCCATCTGTTCAGCAATGGGAGAGCGACCTGTACATGTCAGACAGTCTGATAAAAAAGCTGGATGCTTGAAGGAAGAGCTTGAAATTATTCTTCCAGGGCTGGAGGAGATGCGGAAAAGGAGGTCTGACCGAAGAAATCAATTTATCGAAGTCCAAGAGCAGATACAAGGTATATCTATTGAGATCTATGGGCCCAAAGAATCTGCTCCTGTAAAAAATGTTGAAGAGGAATCTGATCTAACATTGAGAAAGCTTGAAGAATTGCACAGACAGCTGCATACACTTCAAAAAGAAAAGAGTGAACGTCTCAAGAAGGTCCAAGACCAATTAGATACATTAAAATCTTTAACTTCAGTGCTTGGTTTGGACTTCAAACGGACACTCTGCGACCTTAATCCTAGTTTAGGGGATTCTGAACAATCTAAGAGTGTGAGTAATGATTCAATCCGGCAACTAGATGCTGCTACACAAAAACTGCGAGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACGACTATGTTGGAGCTCTGGAACTTGATGGATACACCAGTCGAAGAGCAACAGAAGTTTCAGAATGTTACTTGTAACATAGCTGCTTCAGAAAATGAAATAACTGAGCCTAACAGCTTGTCTATGGACTTTATTCATTATGTTGAGGCAGAAGTAACTAGGCTGGAAGAGATAAAAGCAAGCAAAATGAAAGAGCTCGTGTTGAGGAAGAGAACAGAGCTAGAGGAGATTTGTCAAAAGACGCATTTGGTTTCAGAAGTAGACCGTGCAATCGAATGTGTTATTGAAGCTATAGAGTCAGGATCTGTAGACCCAGCTTGTGTGCTTGAGCAAATTGAGCTTCAGATTGCCAAAGTAAAAGAGGAAGCTTTTAGCCGGAAAGAAATACTTGAGAAGGTTGAGAAATGGCTGGCAGCACGTGATGAGGAGACTTGGTTGGAGGAATATAATAGAGATGAGAACCGATATAATGCTGGCAAAGGAACTCATCTTATTCTCAAGCGAGCTGAGAAAGCCCGTGCCTTGGTTAATAAAATGCCAGCAATGGTGGAGGCCTTGACTTCAAAAACCATCGCATGGGAAAAGGAAAGAGGAATTGAGTTCACATATGATGGTACCTCTCTGCTTTCTATGCTTGAAGAGTACAATACACTACGGCAGGAGAAAGAGCAAGAACGTCGTAGGCAACGGGATCTGAGGAGAATTCAGGGACAAATGATAGCAGAACAGGAAGCAAGATATGGGTCAAAACTAAGTTCATCAAAGCCTCAAACTCCAAGAAAGGCACATAGGACGTCCTCTGGAGGTACAACTAATAAAGGACATGGCGGAGCAACGCTTCAAACTAAAGGTATTGAGTCACGTTTAATGAGGAAGACCGACAATGCACACCAAAGTGATGAATATAATCATTTGGACGATGGCAATTTTTCTTTATCATCAGCAAAAAGGTACGATGTTGCCGGTGGTGTCACTGGGAAAAAGAATTCACTTCGTGGCACAAAATCTCCCATGATGAGACATCATTTTACTCCTATATCTTCAACAACGGTGTCATCAAGAGCAAACATGGAAGATGAATTGAGCATACACAGCGAAAAGTTGCAGAAAGCTATGGCACTAAAATATGTGCCAATATTCACTACTCCCTCCAAGATAGCATCAACAATGATAGAAAATGATGAAGAGGATAAGACTCCAAAGGTATTGCCTATCCCCATCCCGGCTACACCGTCATCGGTAGTTTCAGTTTCTATGAAAATGGCTATGACTCCATTTGGCTGTGACTCGGCGGTTCAAGGGATTGAATACTCTTTTGAGGAAAGAAGAGCTGGGTTTGTGTTGTGTTAG 2106 0.4169 MSIPEIDPFLRAETTCGSLLYELKNLWDEVGVSETERDKTLFEIEQECLHVYRRKVDQANQSRVQLRQEIADSEAELSAICSAMGERPVHVRQSDKKAGCLKEELEIILPGLEEMRKRRSDRRNQFIEVQEQIQGISIEIYGPKESAPVKNVEEESDLTLRKLEELHRQLHTLQKEKSERLKKVQDQLDTLKSLTSVLGLDFKRTLCDLNPSLGDSEQSKSVSNDSIRQLDAATQKLREVKLQRMQKLQDLATTMLELWNLMDTPVEEQQKFQNVTCNIAASENEITEPNSLSMDFIHYVEAEVTRLEEIKASKMKELVLRKRTELEEICQKTHLVSEVDRAIECVIEAIESGSVDPACVLEQIELQIAKVKEEAFSRKEILEKVEKWLAARDEETWLEEYNRDENRYNAGKGTHLILKRAEKARALVNKMPAMVEALTSKTIAWEKERGIEFTYDGTSLLSMLEEYNTLRQEKEQERRRQRDLRRIQGQMIAEQEARYGSKLSSSKPQTPRKAHRTSSGGTTNKGHGGATLQTKGIESRLMRKTDNAHQSDEYNHLDDGNFSLSSAKRYDVAGGVTGKKNSLRGTKSPMMRHHFTPISSTTVSSRANMEDELSIHSEKLQKAMALKYVPIFTTPSKIASTMIENDEEDKTPKVLPIPIPATPSSVVSVSMKMAMTPFGCDSAVQGIEYSFEERRAGFVLC 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0272 701 MobiDBLite consensus disorder prediction 575 594 - -
Lele45g0272 701 MobiDBLite consensus disorder prediction 499 530 - -
Lele45g0272 701 Coils Coil 49 76 - -
Lele45g0272 701 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 514 - -
Lele45g0272 701 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Lele45g0272 701 Gene3D - 367 501 - -
Lele45g0272 701 MobiDBLite consensus disorder prediction 492 538 - -
Lele45g0272 701 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 542 IPR007145 GO:0000226|GO:0008017
Lele45g0272 701 Coils Coil 606 626 - -
Lele45g0272 701 Coils Coil 149 194 - -
Lele45g0272 701 Coils Coil 460 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0272 Lele-ChrLele45 2220167 2227225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0272 13 520 EF-hand Containing Proteins AT5G62250 58.333 2.01e-180 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0272 45 2220167 2227225 Lele05g2017 05 14384678 14387110 CCT
Lele45g0272 45 2220167 2227225 Lele06g1855 06 13039770 13042202 CCT
Lele45g0272 45 2220167 2227225 Lele07g2060 07 13845512 13847944 CCT
Lele45g0272 45 2220167 2227225 Lele08g1855 08 12903846 12906278 CCT
Lele45g0272 45 2220167 2227225 Lele46g0296 46 1948425 1965969 ECH
Lele45g0272 45 2220167 2227225 Lele45g0272 45 2220167 2227225 ECH
Lele45g0272 45 2220167 2227225 Lele47g1113 47 16756564 16769745 hybridization