Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1221 ATGGTGATGAAGAAGAGGGATGAGGAGCTCGCTCTGTTCCTTGAGATGCGGAGGAGGGAGAAAGAGAATGAGAAAAACAATCTTCTCTTTCTTCAGAACTCCGACGAGCTCGATGGATCTAATCTGGAATCTAATCGGGTTAGTTCTCCCATTTCTAAGTTGGTAACTTCGGCGGTGCCACGGAAAACGAGTACTGATGAGTTTCTAGCTTCAGAGAATGACAAGTCTGATTATGATTGGCTTCTGACGCCCCCTGATACGCCTCTTTTCCCTACATTGGAGAAGGAGTCTCAGATATCAGTCAAGAGTGAAAAGGAGAATCCTACTGCTCGTTCAACAGCTTTAATACCTTGGCCAGCTAATGTTCAATCGGAACCTGCTTCAAAAAACAATTTAAGCTCCAAGCGTCATGCAGCAATTCCTGGCCGTAGTTCTTCTAATACTGCTAATAATAGGAGAACCTCATCGTCAGCCACTTCCAGGTCTGTGACACCATCTGGAAGGCCAACATTGCCTTCAACAACCAAATACTCTAGGCCCTCTACGCCTACATCGCGGGCCACGGTAACTTCTGCAAAGCCTGTAGCTCAACCTGTGAGATCATCCACACCTACTGGTACTAGGGCCACTGCTCCACCAGTGAGATCATCCACTCCTACTGGAGCTAGGGCCACTGCTCGTTCCTCAACACCAACTTCCAGACCTTCTTTGACAGCTCCGAAGACTACTCGAAGATCATCAACTCCAACCCTTCGATCTTCAACCCCATCAAGTGCAAATGGATTGTCTGCACCTGTCTCTCGATCTTCATCAGCATCAAAAGCACGCCCAGCACAAGTGAAAAATCCGGTTCCATCACGTGGAAGCTCTCCATCTGCAAAATCTAGGCCTTGGGAACCCTCACAAATGCCGGGGTTCTCAGTCGAGGCTCCTCCAAATTTGAAGACATCATTGCCAGAAAGACCAGCTTCAGCCTCTAGGACTAGGCCTGGTACAACTAATTCTAGACCATCTTCTTCCCTTGAGGCCGCAGCTAGTAGTGATGGAAAATCGAAAAGACAGTCAGGTACTCCTTCCAGAGGAAGGGCTTCAACTGGGATTGCTCAAAGTAATCATGGCTCGTTTCAAGCTCTGAATAGATCTCGTTTCATTGATGGTGATAATGATAGCCCAGTTGTAGTCGGGACTAAAATGGTTGAAAGAGTTGTGAACATGAGAAAATTGGCACCACCAAAGCATGAAGATCCTTGTTCTGCCCATAGCAGTTCTGGCAAGTCTTCATTGTCTGAAAGCACTGGATTCGGAAGAACACTTTCTAAGAATTCCTTAGATATGGCAATGAGGCATATGGACATTAGGCGAAGTATTAAGGGGAACCTGAAGCCACTTGTGACAAGCATTCCAACTTACTCTATGTACAGTGTGAGATCAGCTGGTTCATCAAATAGCAGGACAATGAATGTTTCTAATTCTCCTCTTGCCACTAGCAGCACTGCCAGTTCTGAACCAAGTGTAAACTTCAATTCCATCTCTTATGATGGAAGTGAGATTGAAGAAAATGATCTAGCAAGTGATAGGGGAAACTCTTCGCCTGCTAGTCATCTCAGCAGATCAGCGACTTGGGATTTTCATCCATCTAACAGAATTGGTGATGGAGGTTATGGAGTTGTCTATAAGGGAGTTTTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTTTCCAAAAGCAAATGTGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGTTGTGGGGATTTTGGCCTTGCAAAGCTTTTTCCCGATGATGTCACTCATGTTAGTACTCGAGTGGCAGGAACCGTCCGTAAAAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTAGACCCCGAACTAAGTGAATATGATGAGATGCATGTGTTGCTTTACAGGTGGAATAGCTCGAAAGAGTATGGTAATTCTTCGTTGGATGAGACATCTTCTCAAGCAAACAAGTACAGAAGTTCCAAAAATCCCTACATGACATCAAGCCATTTTAGTGATGCTGATTTGGATACAGATAGTTCCTAG 2130 0.4531 MVMKKRDEELALFLEMRRREKENEKNNLLFLQNSDELDGSNLESNRVSSPISKLVTSAVPRKTSTDEFLASENDKSDYDWLLTPPDTPLFPTLEKESQISVKSEKENPTARSTALIPWPANVQSEPASKNNLSSKRHAAIPGRSSSNTANNRRTSSSATSRSVTPSGRPTLPSTTKYSRPSTPTSRATVTSAKPVAQPVRSSTPTGTRATAPPVRSSTPTGARATARSSTPTSRPSLTAPKTTRRSSTPTLRSSTPSSANGLSAPVSRSSSASKARPAQVKNPVPSRGSSPSAKSRPWEPSQMPGFSVEAPPNLKTSLPERPASASRTRPGTTNSRPSSSLEAAASSDGKSKRQSGTPSRGRASTGIAQSNHGSFQALNRSRFIDGDNDSPVVVGTKMVERVVNMRKLAPPKHEDPCSAHSSSGKSSLSESTGFGRTLSKNSLDMAMRHMDIRRSIKGNLKPLVTSIPTYSMYSVRSAGSSNSRTMNVSNSPLATSSTASSEPSVNFNSISYDGSEIEENDLASDRGNSSPASHLSRSATWDFHPSNRIGDGGYGVVYKGVLRDGTQVAIKSLSKSKCVALDWPKRAAICCGDFGLAKLFPDDVTHVSTRVAGTVRKSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDPELSEYDEMHVLLYRWNSSKEYGNSSLDETSSQANKYRSSKNPYMTSSHFSDADLDTDSS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1221 709 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Lele43g1221 709 MobiDBLite consensus disorder prediction 671 709 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 407 439 - -
Lele43g1221 709 PANTHER GASTRIC MUCIN-LIKE PROTEIN 2 535 - -
Lele43g1221 709 SUPERFAMILY Protein kinase-like (PK-like) 537 615 IPR011009 -
Lele43g1221 709 MobiDBLite consensus disorder prediction 93 297 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 478 505 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 671 703 - -
Lele43g1221 709 Gene3D Phosphorylase Kinase; domain 1 515 587 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 420 439 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 319 374 - -
Lele43g1221 709 MobiDBLite consensus disorder prediction 62 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1221 Lele-ChrLele43 20527974 20536388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1221 537 660 Receptor kinase-like Gene Family AT1G56120 26.316 3.39e-14 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1221 43 20527974 20536388 Lele37g1278 37 21996731 22002404 CCT
Lele43g1221 43 20527974 20536388 Lele38g1177 38 22860324 22867078 CCT
Lele43g1221 43 20527974 20536388 Lele39g0132 39 844823 849224 CCT
Lele43g1221 43 20527974 20536388 Lele40g1117 40 21344914 21349247 CCT
Lele41g0138 41 1043494 1053209 Lele43g1221 43 20527974 20536388 hybridization
Lele42g0137 42 1087011 1090098 Lele43g1221 43 20527974 20536388 hybridization