Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1177 ATGAACTGGGATTTGGATCTGAGGCTTATCTGGGGTTTGCTTCTTCAACCCTTTAGGAGAAAGAGACATTTCGACCCAAGATCCACCAGGAGATTCGGACATCACTGCCTTTCTCGTATTTCGGAGACAATGTTGCCTCAGAAGCAGGCGGAGGAAGCCATAGTCACCAACAACTTCACCGAAACAGAGAATGATGGAGGAGGCACCATCGTTAGGGAAGAAGAGAAAGAGCAATATAACTCCATTTTCAACCTCAAGAACTTACTCTGGCATGGAGGCTCCGTTTGGGACGCCTGGTTCAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTGTTGACGCTTCCCTATTCGTTTTCCCAGCTGGGTATGCTCTCAGGGATATTGTTGCAAGTATTTTACGGCATAATGGGAAGCTGGACGGCTTATCTAATCAGTGTCCTCTATGTGGAATACCGTACCAGAAAGGAAAAGGAAAACGTTAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTGCTGGATGGATTGCTGGGTCCGTATTGGAAAGCTGTGGGGCTGGCATTCAACTGTACTTTCCTCCTCTTCGGATCTGTGATTCAGCTCATAGCTTGTGCAAGTAACATCTACTACATAAACGACAAATTGGACAAACGAACTTGGACATACATATTTGGAGCTTGCTGTGCGACGACGGTGTTCATTCCATCGTTTCACAACTATCGAATCTGGTCATTTCTGGGACTTGGAATGACAACTTACACAGCTTGGTATATGACAATCGCAGCGCTTCTTCATGGCCAGGCGGAGGGGGTGACTCACTCCGGTCCGACGAAGCTGGTGCTGTACTTCACCGGAGCGACTAATATACTGTACACGTTTGGTGGCCACGCCGTTACTGTGGAGATAATGCATGCCATGTGGAAGCCGCAGAAGTTCAAGTACATATATCTGTTGGCGACACTGTACGTGTTCACGCTGACTCTTCCCTCTGCCGCCGCCGTTTACTGGGCCTTCGGCGACCAGCTCCTCACCCATTCCAACGCCTTCTCTCTCCTTCCCAAGACCCGTTTCCGTGATGCTGCCGTCATCCTCATGCTCATCCACCAGTTCATAACATTCGGGTTCGCGTGTACTCCATTGTACTTCGTGTGGGAGAAGGTTATCGGCATGCATGACACCAGGAGCATCTGCCTCCGAGCACTCGCCCGGTTGCCGGTCGTCATCCCCATTTGGTTCTTAGCCATCATCTTCCCTTTCTTCGGCCCCATTAACTCTGCCGTCGGAGCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCTCTCGCTCATATGCTCACCTACAGAAAAGCCTCCGCCCGACAGAATGCTGCAGAGAAGCCTCCCTTCTTCATGCCAAGCTGGACTGCAATGTTTGTGTTCAATGCCTTCATTGTGGTTTGGATCTTTGTGATTGGATTCGGGTTTGGAGGATGGGCCAGCATGACCAATTTCATCAGGCAAATTGACACTTTCGGCCTCTTTGCCAAGTGCTACCAGTGTCAGCCTTCCGGCCTGCCGCCTCCCAAGATGGCGCCGCCCCCTCACGCTCGTCATCTCTGA 1602 0.5075 MNWDLDLRLIWGLLLQPFRRKRHFDPRSTRRFGHHCLSRISETMLPQKQAEEAIVTNNFTETENDGGGTIVREEEKEQYNSIFNLKNLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGIMGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAALLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSAAAVYWAFGDQLLTHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFMPSWTAMFVFNAFIVVWIFVIGFGFGGWASMTNFIRQIDTFGLFAKCYQCQPSGLPPPKMAPPPHARHL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1177 533 Pfam Transmembrane amino acid transporter protein 91 484 IPR013057 -
Lele38g1177 533 PANTHER OS05G0424000 PROTEIN-RELATED 98 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1177 Lele-ChrLele38 22860324 22867078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1177 44 532 Organic Solute Cotransporters AT2G21050 76.483 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0137 42 1087011 1090098 Lele38g1177 38 22860324 22867078 CCT
Lele43g1221 43 20527974 20536388 Lele38g1177 38 22860324 22867078 CCT
Lele44g1216 44 20635681 20638818 Lele38g1177 38 22860324 22867078 CCT
Lele38g1177 38 22860324 22867078 Lele39g0132 39 844823 849224 hybridization
Lele38g1177 38 22860324 22867078 Lele40g1117 40 21344914 21349247 hybridization