Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1278 ATGTCATCATCTTGTCATGAGAAAGAGACATTTCGACCCAGATCCACCAGGAGATTTGGACATCACTGCCTTTCTCGTATTTCGGAGACAATGTTGCCTCAGAAGCAGGCAGAGGAAGCCATAGTCACCAACAACTTCACCGAAACAGAGAATGATGGAGGAGGCATCGTTGGGGAAGAAGAGAAGGAGCAAGATAACTCCATGTTCACCCTCAAGAGCTTCCTCTGGCATGGCGGCTCCGTTTGGGACGCCTGGTTCAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTGTTGACTCTCCCCTATTCGTTTTCCCAACTGGGTATGCTTTCAGGGATATTGCTGCAAGTATTTTACGGCATACTCGGAAGCTGGACGGCTTATCTAATCAGTGTCCTCTATGTGGAATACCGTACCAGAAAGGAAAAGGAAAACGTTAGCTTCAAGAACCATGTCATTCAGTGGTTCGAGGTGCTGGATGGATTGCTGGGTCCGTATTGGAAAGCAGTGGGGCTGGCCTTCAACTGTACTTTCCTCCTCTTCGGATCTGTGATTCAGCTCATAGCTTGTGCAAGTAACATATACTACATAAACGACAAATTGGACAAACGAACTTGGACATACATATTTGGAGCTTGCTGTGCGACGACAGTGTTCATACCTTCGTTTCATAACTATCGAATCTGGTCATTTCTGGGACTTGGAATGACAACTTACACAGCTTGGTATTTGACAATCGCAGCGCTTCTTCATGGCCAGGCGGAGGGGGTGACGCACTCCGGTCCGACGAAGCTGGTGCTGTACTTCACCGGTGCGACTAATATACTGTACACGTTTGGTGGCCACGCCGTTACTGTGGAGATAATGCATGCCATGTGGAAGCCACAGAAGTTCAAGTACATTTATCTGTTGGCCACACTGTACGTGTTCACGCTGACTCTTCCATCGGCCGCCGCCGTCTACTGGGCCTTCGGCGACCAGCTGCTCACCCATTCCAACGCCTTCTCCCTCCTTCCCAAGACCCGTTTCCGCGATGCCGCCGTCATCCTCATGCTCATCCACCAGTTCATAACATTCGGATTTGCTTGTACTCCATTGTACTTCGTGTGGGAGAAGGTGATCGGCATGCATGACACCAGAAGCATCTGCCTGAGAGCCCTCGCCAGGTTGCCGGTCGTCATCCCCATTTGGTTCTTAGCCATCATCTTCCCTTTCTTCGGCCCCATTAACTCCGCCGTCGGAGCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCTCTCGCCCATATGCTCACCTACAGAAAAGCCTCCGCCCGGCAGAATGCTGCAGAGAAGCCTCCATTCTTCATGCCAAGCTGGACTGCAATGTTTGTGTTCAATGCCTTCATTGTGGTTTGGATATTTGTGGTTGGATTTGGGTTTGGAGGATGGGCCAGCATGACCAATTTCATCAGGCAAATCGACAATTTCGGCCTCTTTGCCAAGTGCTACCAGTGCCAGCCTTCCGGCCTGCCGCCTCCCAAGGTGGCACCACCCCCTCACGCTCGTCATCTCTAA 1560 0.5109 MSSSCHEKETFRPRSTRRFGHHCLSRISETMLPQKQAEEAIVTNNFTETENDGGGIVGEEEKEQDNSMFTLKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSAAAVYWAFGDQLLTHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFMPSWTAMFVFNAFIVVWIFVVGFGFGGWASMTNFIRQIDNFGLFAKCYQCQPSGLPPPKVAPPPHARHL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1278 519 Pfam Transmembrane amino acid transporter protein 77 469 IPR013057 -
Lele37g1278 519 PANTHER OS05G0424000 PROTEIN-RELATED 68 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1278 Lele-ChrLele37 21996731 22002404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1278 31 518 Organic Solute Cotransporters AT2G21050 77.459 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0137 42 1087011 1090098 Lele37g1278 37 21996731 22002404 CCT
Lele43g1221 43 20527974 20536388 Lele37g1278 37 21996731 22002404 CCT
Lele44g1216 44 20635681 20638818 Lele37g1278 37 21996731 22002404 CCT
Lele37g1278 37 21996731 22002404 Lele39g0132 39 844823 849224 hybridization
Lele37g1278 37 21996731 22002404 Lele40g1117 40 21344914 21349247 hybridization