Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0132 ATGAATGGATTAAGGGAGAATCAGAGCCGTGGAATCGACTTTTATGGCCTTATAAAGGGGAGAGCCTTCCGTTCATTTCACTTGATACTGATCAGAACGACGTCTCGCTCGCTCACTTGCTTCGGTCTCCATCCGAAACTCTGTGTCACCAACAAATTGAGACCCTCAAGAATCGATTCGCAATTCCAAATACACAGTGAACTCATTTGTGAGAAAGAGACATTTCGACCCAGATCCACCGGGAGATTTGGACATCACTGCCTTTCTCGTATTTCGGACACAATGTTGACTCAGAAGCAGGCAGAGGAAGCCATAGTCACCAACAACTTCACCGAAACGGAGAATGATGGAGGAGGCATCGTTGGGGAAGAAGAGAAGGAGCAAGATAACTCCATGTTTACCCTGAAGAGTTTCCTCTGGCATGGCGGCTCCGTTTGGGACGCCTGGTTCAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTGTTGACTCTCCCCTATTCGTTTTCCCAACTGGGTATGCTTTCAGGGATATTGCTGCAAGTATTTTACGGCTTAATGGGAAGCTGGACGGCTTATCTAATCAGTGTCCTCTATGTGGAATACCGTACCAGAAAGGAAAAGGAAAACGTGAGCTTCAAGAACCATGTCATTCAGTGGTTCGAGGTGCTGGATGGATTGCTGGGTCCGTATTGGAAAGCAGTGGGGCTGGCCTTCAACTGTACTTTCCTCCTCTTCGGATCTGTGATTCAGCTCATAGCTTGTGCAAGTAACATATACTACATAAACGACAAATTGGACAAAAGAACTTGGACATACATATTTGGAGCTTGCTGTGCGACGACAGTGTTCATACCTTCGTTTCATAACTATCGAATCTGGTCATTTCTGGGACTTGGAATGACAACTTACACAGCTTGGTATTTGACAATCGCAGCGCTTCTTCATGGCCAGGCGGAGGGGGTGACGCACTCCGGTCCGACGAAGCTGGTGCTGTACTTCACCGGAGCGACTAATATACTGTACACGTTTGGTGGCCACGCCGTTACTGTGGAGATAATGCATGCCATGTGGAAGCCACAGAAGTTCAAGTACATTTATCTGTTGGCGACACTGTACGTGTTCACGCTGACTCTTCCATCGGCCGCCGCCGTCTACTGGGCCTTCGGCGACCAGCTGCTCACCCATTCCAACGCCTTCTCCCTCCTTCCCAAGACCCGTTTCCGCGATGCCGCCGTCATCCTCATGCTCATCCACCAGTTCATAACATTCGGATTTGCGTGTACTCCATTGTACTTCGTGTGGGAGAAGGTGATCGGCATGCATGACACCAGAAGCATCTGCCTGAGAGCCCTCGCCAGGTTGCCGGTCGTCATCCCCATTTGGTTCTTAGCCATCATCTTCCCTTTCTTCGGACCCATTAACTCCGCCGTCGGAGCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCTCTCGCCCATATGCTGACCTACAGAAAAGCCTCCGCCCGGCAGAATGCTGCAGAGAAGCCTCCGTTCTTCATGCCAAGCTGGACTGCAATGTTTGTGTTCAATGCCTTCATTGTGGTTTGGATATTTGTGGTTGGATTTGGGTTTGGGGGATGGGCCAGCATGACCAATTTCATCAGGCAAATTGACAATTTCGGCCTCTTTGCCAAGTGCTACCAGTGCCAGCCTTCCGGCCCGCCGCCTCCCAAGGTGGCACCGCCCCCTCACGCTCGTCATCTCTAA 1752 0.5057 MNGLRENQSRGIDFYGLIKGRAFRSFHLILIRTTSRSLTCFGLHPKLCVTNKLRPSRIDSQFQIHSELICEKETFRPRSTGRFGHHCLSRISDTMLTQKQAEEAIVTNNFTETENDGGGIVGEEEKEQDNSMFTLKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGLMGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSAAAVYWAFGDQLLTHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFMPSWTAMFVFNAFIVVWIFVVGFGFGGWASMTNFIRQIDNFGLFAKCYQCQPSGPPPPKVAPPPHARHL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0132 583 Pfam Transmembrane amino acid transporter protein 141 533 IPR013057 -
Lele39g0132 583 PANTHER OS05G0424000 PROTEIN-RELATED 129 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0132 Lele-ChrLele39 844823 849224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0132 95 582 Organic Solute Cotransporters AT2G21050 77.049 0.0 779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0137 42 1087011 1090098 Lele39g0132 39 844823 849224 CCT
Lele43g1221 43 20527974 20536388 Lele39g0132 39 844823 849224 CCT
Lele44g1216 44 20635681 20638818 Lele39g0132 39 844823 849224 CCT
Lele37g1278 37 21996731 22002404 Lele39g0132 39 844823 849224 hybridization
Lele38g1177 38 22860324 22867078 Lele39g0132 39 844823 849224 hybridization