Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1117 ATGAATAGATTAAGGGAGAATCTTAGCCGTTCAATTGACTTTTATGGGCTTATAAAGGGGAGGGCGTTCCGTTCATTTCGCTTGTTACTTATCGGAACGACTCCTCTCTCACTTCCTCGCTTCAGTCCCCATTCGAAACCGTCACCAACAGACTGTGAGATACCCACCAAGAATCGATTCGGAATTCCGAATACACAATCTGGGGTTTGCTTCATCAACCCTTTAGGAGAAAGAGACATTTCGACCAAGATTCACCAGGAGATTTGGCATCACTGCCTTTCGCGTATTTCGGAGACAATGTTGCCTCAGAAGCAGGCAGAGGAAGCCATAGTCACCAACAACTTCACCGAAACGGAGAATGATGGAGGAGAAATCATCGTTAGGGAAGAAGAGAAGGAGCAATATAACTCCACTTTCACCCTCAAGAGCTTACTCTGGCATGGCGGCTCCGTTTGGGACGCCTGGTTTAGCTGTGCTTCAAATCAAGTAGCTCAAGTGCTGTTGACGCTTCCCTATTCGTTTTCCCAGCTGGGTATGCTCTCAGGGATATTGCTGCAAGTATTTTACGGCATAATTGGAAGCTGGACGGCTTATCTAATCAGTGTCCTCTATGTGGAATACCGTACTAGAAAGGAAAAGGAAAACGTTAGCTTCAAAAACCATGTCATTCAGTGGTTCGAAGTGCTGGATGGATTGCTGGGTCCGTACTGGAAAGCTGTGGGGCTGGCCTTCAACTGTACTTTCCTCCTCTTCGGATCTGTGATTCAGCTCATAGCTTGTGCAAGTAACATCTACTACATAAACGACAAATTGGACAAACGAACTTGGACATACATATTTGGAGCTTGCTGTGCGACGACTGTGTTTATTCCATCGTTTCACAACTATCGAATCTGGTCATTTCTGGGACTTGGAATGACAACTTACACAGCTTGGTATATGACAATCGCAGCGCTTCTTCATGGCCAGGCGGAGGGGGTGAATCACTCCGGTCCGACGAAGCTGGTGCTGTACTTCACCGGAGCGACTAATATACTGTACACGTTTGGGGGCCACGCCGTTACTGTGGAGATAATGCATGCCATGTGGAAGCCGCAGAAGTTCAAGTACATATATCTGTTGGCGACACTGTACGTGTTCACGCTGACTCTTCCGTCTGCCGCCGCCGTCTACTGGGCCTTCGGCGACCAGCTCCTCACCCATTCCAACGCCTTCTCTCTCCTTCCCAAGACCGGTTTCCGTGATGCTGCCGTCATCCTTATGCTCATCCACCAGTTCATAACATTCGGGTTCGCGTGTACTCCATTGTACTTCGTGTGGGAGAAGGTGATCGGCATGCATGACACCAGGAGCATCTGCCTCCGAGCACTAGCCCGGTTGCCGGTCGTCATCCCCATTTGGTTCTTAGCCATCATCTTCCCTTTCTTCGGCCCCATTAACTCTGCCGTCGGAGCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCTCTCGCTCATATGCTCACCTACAGAAAAGCCTCCGCCCGACAGAATGCTGCAGAGAAGCCTCCGTTCTTCATGCCAAGCTGGACTGCAATGTTTGTGTTGAATGCCTTCATTGTGGTTTGGATCTTTGTGATTGGATTCGGGTTTGGAGGATGGGCCAGCATGACAAATTTCATCAGGCAAATTGACACTTTCGGCCTCTTTGCCAAGTGCTACCAGTGCCAGCCTTCCGGCCTGCCGCCTCCCAAGGTGGCGCCGCCCCCTCACGCTCGTCATCTCTGA 1770 0.5017 MNRLRENLSRSIDFYGLIKGRAFRSFRLLLIGTTPLSLPRFSPHSKPSPTDCEIPTKNRFGIPNTQSGVCFINPLGERDISTKIHQEIWHHCLSRISETMLPQKQAEEAIVTNNFTETENDGGEIIVREEEKEQYNSTFTLKSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGIIGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAALLHGQAEGVNHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSAAAVYWAFGDQLLTHSNAFSLLPKTGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFMPSWTAMFVLNAFIVVWIFVIGFGFGGWASMTNFIRQIDTFGLFAKCYQCQPSGLPPPKVAPPPHARHL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1117 589 Pfam Transmembrane amino acid transporter protein 147 540 IPR013057 -
Lele40g1117 589 PANTHER OS05G0424000 PROTEIN-RELATED 138 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1117 Lele-ChrLele40 21344914 21349247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1117 100 588 Organic Solute Cotransporters AT2G21050 76.483 0.0 782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0137 42 1087011 1090098 Lele40g1117 40 21344914 21349247 CCT
Lele43g1221 43 20527974 20536388 Lele40g1117 40 21344914 21349247 CCT
Lele44g1216 44 20635681 20638818 Lele40g1117 40 21344914 21349247 CCT
Lele37g1278 37 21996731 22002404 Lele40g1117 40 21344914 21349247 hybridization
Lele38g1177 38 22860324 22867078 Lele40g1117 40 21344914 21349247 hybridization