Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0852 ATGAGCGTGGTTGGTTTTGATTTTGGGAATGAGAGCTGCATTGTGGCTGTTGCAAGGCAGAGGGGGATTGATGTCGTACTCAATGACGAGTCCAAGCGTGAAACTCCTGCAGTTGTATGCTTCGGTGACAAGCAAAGGTTCATTGGGACTGCTGGGGCTGCATCCACTATGATGAACCCCAAGAATGCAATCTCACAGATAAAGAGACTAATTGGTAAACAGTTTTCTGACCCAGAATTGCAGCGCGATCTGAAATCATTGCCTTATGCTGTCACTGAAGGGCCTGATGGATTTCCATTAATTCAGGCACGGTATTTGGGTGAAGTTAGAACATTTACACCCACTCAAGTCCTGGGAATGGTGTTGTCAGATCTCAAGGAGATAGCTGAGAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCGGTGTATTTTACCGATCTTCAGAGAAGGGCAGTCTTGGATGCGGCGAAGATTGCTGGCCTGCATCCTCTTCGCTTGATTCATGAAACAACAGCAACTGCCTTGGCTTATGGAATATATAAAACAGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGCTTTAAAAAGGGTCAGCTGAAAGTATTGGCCCATTCATTTGATAGGTCTCTAGGTGGTAGAGATTTTGATGAGGTCTTGTTCAATCACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTGTCTTAGGCTCAGGGCTGCATGTGAGAAGCTGAAGAAGGTTCTCAGTGCAAATCCTGAGGCACCCCTGAACATTGAATGCCTAATGGAGGAGAAGGACGTCAGGGGATTCATCAAGCGTGATGTCTTTGAGCAACTAAGTGTTCCAATTTTGGAGCGTGTGAAGGCACCTTTAGAGAAGGCCTTAGCAGAAGCAAACCTTACAGTTGAGAATATTCACATGGTCGAGGTGGTTGGCTCAGGTTCTCGTGTACCAGCCATAAACAAAATATTGACAGAATTTTTTAAAAAGGAGCCTAGGCGCACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCGACATTTAAAGTACGAGAGTTTCAGGTCAATGAAGGCTTTCCGTTTTCAATTTCACTGTCATGGAAAGGTTCTGGTCCAGATGCACAAGAAAGTGGACCAGATAATCATCAAAGTACTGTTGTTTTTCCCAAAGGAAATGCCATACCTAGTGTCAAGGCCCTGACATTCTATAGGTCAGGAACTTTTTCTGTTGATGTACAGTATGATGATATGAGTGAGCTGCAAGGACCTGCAAAGATTAGCACATATACTATTGGTCCTTTCCAAACTACAGATAGTGAAAGAGCAAAAGTTAAAGTGAAAGTTCGTCTGAATTTGCATGGAATTGTATTTGTTGAGTCAGCTACTCTCTTGGAAGAGGAAATTGTTGAGGTACCAGTGTCTAAAGAACCAGCTGGAGAAAATGCTAAGATGGACACTGACGAGGCTCCTACTGATGCTGCTGCCCCGCCACCAAGCTCTAATGATACTGATGTCAATATGCAAGATGCAAAGGCAACTGCTGATACCACTGGGGTTGAAAATGGCATTCCTGGTACAGCAGACAAGCCTGTGCAGATGGATACAGACACCAAGGCTGAGGCTCCAAAGAAGAAGGTCAAGAAGACAAATATACCTTTCTCAGAGAAGGTTTATGGAGCCCTGGCCCCTGCAGATCTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTACAAGATCGAGTGATGGAGGAAACAAAAGACAGGAAAAACGCAGTTGAGTCATATGTTTATGACATGAGAAACAAGCTTGCTGACAAATACCAAGATTTTGTCACTGCTCAAGAGAGGGAGGAGTTTACTGCCCAACTTCAGGAGGTAGAAGACTGGTTATATGAAGATGGTGAAGATGAAACTAAAGGTGTATACGTTGCCAAGCTTGAGGAACTCAAGAAGCGAGGTGATCCAATTGAAGAGCGTTACAAGGAATTTATGGAGAGGGGTACAATAATCGATCAGTTCATCTATTGCATAAATAGTTACAGAGAAGCTGCCATGTCAAATGATCCCAAATTTGATCATATCGACATCTCCGAGAAGCAGAACGTATTGAATCAATGTGTGGAAGCTGAGTCATGGCTCAGGGAGAAGCAGCAGCAGCAGGATTCACTTCCAAAACATGCTTCTCCTGTACTCCTATCAGCTGACATAAGAAAGAAAGCTGAGGCAGTTGATAGGTTCTGTAAGCCGATCATGACGAAACCAAGGCCGGCCAAGCCAGCTAGTCCTGAAGCAACTGCGACTCCACCTCCTCAGGGCGGTGAACGGCCACCACAAAAAACTGAGGGGGATGCAAACACCAATGCTAACGCGGGCACCAATGAAAATGCTGGGGACGGTGCTGCTGGTCAGGCACCACCACCACCGGGGACTGAACCAATGGAGACTGACAAGTCAGAGAACACAAGCTCTGCATAA 2586 0.449 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNAISQIKRLIGKQFSDPELQRDLKSLPYAVTEGPDGFPLIQARYLGEVRTFTPTQVLGMVLSDLKEIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAAKIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDVFEQLSVPILERVKAPLEKALAEANLTVENIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNEGFPFSISLSWKGSGPDAQESGPDNHQSTVVFPKGNAIPSVKALTFYRSGTFSVDVQYDDMSELQGPAKISTYTIGPFQTTDSERAKVKVKVRLNLHGIVFVESATLLEEEIVEVPVSKEPAGENAKMDTDEAPTDAAAPPPSSNDTDVNMQDAKATADTTGVENGIPGTADKPVQMDTDTKAEAPKKKVKKTNIPFSEKVYGALAPADLQKAVEKEFEMALQDRVMEETKDRKNAVESYVYDMRNKLADKYQDFVTAQEREEFTAQLQEVEDWLYEDGEDETKGVYVAKLEELKKRGDPIEERYKEFMERGTIIDQFIYCINSYREAAMSNDPKFDHIDISEKQNVLNQCVEAESWLREKQQQQDSLPKHASPVLLSADIRKKAEAVDRFCKPIMTKPRPAKPASPEATATPPPQGGERPPQKTEGDANTNANAGTNENAGDGAAGQAPPPPGTEPMETDKSENTSSA 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0852 861 CDD HSPA4_like_NDB 2 381 - -
Lele41g0852 861 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Lele41g0852 861 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 595 IPR029047 -
Lele41g0852 861 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Lele41g0852 861 Gene3D - 38 113 - -
Lele41g0852 861 PRINTS 70kDa heat shock protein signature 140 160 - -
Lele41g0852 861 PRINTS 70kDa heat shock protein signature 332 348 - -
Lele41g0852 861 PRINTS 70kDa heat shock protein signature 2 15 - -
Lele41g0852 861 PRINTS 70kDa heat shock protein signature 363 383 - -
Lele41g0852 861 PRINTS 70kDa heat shock protein signature 30 42 - -
Lele41g0852 861 MobiDBLite consensus disorder prediction 817 833 - -
Lele41g0852 861 FunFam Heat shock 70 kDa protein 14 387 595 - -
Lele41g0852 861 MobiDBLite consensus disorder prediction 532 551 - -
Lele41g0852 861 Gene3D - 597 706 IPR029048 -
Lele41g0852 861 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lele41g0852 861 Gene3D Actin; Chain A, domain 4 230 313 - -
Lele41g0852 861 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 697 IPR029048 -
Lele41g0852 861 MobiDBLite consensus disorder prediction 511 579 - -
Lele41g0852 861 FunFam Heat shock 70 kDa protein 4 1 81 - -
Lele41g0852 861 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 719 795 IPR029048 -
Lele41g0852 861 MobiDBLite consensus disorder prediction 787 861 - -
Lele41g0852 861 Gene3D - 186 360 - -
Lele41g0852 861 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lele41g0852 861 PANTHER HSC70CB, ISOFORM G-RELATED 1 838 - -
Lele41g0852 861 MobiDBLite consensus disorder prediction 798 812 - -
Lele41g0852 861 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lele41g0852 861 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Lele41g0852 861 FunFam Heat shock 70 kDa protein 4 597 707 - -
Lele41g0852 861 FunFam Heat shock 70 kDa protein 4 111 206 - -
Lele41g0852 861 Gene3D - 5 374 - -
Lele41g0852 861 FunFam Heat shock 70 kDa protein 4 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0852 Lele-ChrLele41 18207492 18211294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0852 4 438 Calmodulin-binding Proteins AT1G16030 35.845 1.41e-86 287
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0852 41 18207492 18211294 Lele37g0441 37 3591172 3616036 CCT
Lele41g0852 41 18207492 18211294 Lele38g0406 38 3254495 3256589 CCT
Lele41g0852 41 18207492 18211294 Lele39g0989 39 18716405 18718692 CCT
Lele41g0852 41 18207492 18211294 Lele40g0386 40 3099977 3109795 CCT
Lele41g0852 41 18207492 18211294 Lele43g0540 43 4884233 4888291 hybridization