Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1281 ATGAGGGACAAGTTGAGTTTTTTGTTGGGTGTTTGGATTTTTTTGTGTGGGTGTTGTGCGGGTAGGTTTGTGGTGGAGAAGAACAATTTGAAAGTCACTGCTCCGAAATCATTGAGAGGCGTGTATGAGTGTGCGATTGGGAATTTTGGAGTCCCCAAGTATGGAGGAGCCATGATAGGCTCTGTGGTATACCCAAACACGAATCAGAGGGGATGCAAGAGCTTTTATGATGATACTTTGTTCAAGTCAAAGCCTGGAAGCTTTCCTGTCGTTCTTCTTGTGGATCGAGGAGATTGCTACTTCACCTTGAAGGCCTGGAATGCACAGAATGGTGGAGCAGCAGCTATTCTTGTTGCAGATGACAGACTAGAACCATTGATCACCATGGACACTCCTGAAGAGGGTTCTGTAGCAAATGATGAATATGTGCAGAAGATCAGCATTCCTTCTGCTCTTATCAGCAAATCATTGGGGGATAGCATCAAGAAGGCTCTGTCAAATGGAGAGATGGTTACCATAAATCTTGATTGGAGTGAGACACTTCCACATCCTGACGAGAGAGTTGAGTATGAGTACTGGACAAATAGCAATGATGAGTGTGGACCAAAGTGTGACAGTCAAATTAATTTTGCCAAGAACTTTAAAGGGGCAGCTCAATTACTTGAACAGAAGGGGTTCACTCAGTTTACCCCTCACTACATAACTTGGTATTGCCCTGAGGCATTTATTTTGAGCAAACAGTGTAAGTCTCAGTGCATAAACCATGGGAGATATTGTGCTCCAGATCCTGAACAAGATCTCAGTAGAGGATATGATGGTAAAGATGTTGTTGTTCAAAACCTACGCCAAGCATGCTTCTTTAAAGTGGCAAATGAAAGCGGAAAACCTTGGCAATGGTGGGACTATGTCACAGACTTTGCAATCCGTTGCCCAATGAAAGAGAATAAGTACACCGAAGGATGCTCTGATCAAGTTATCAAATCTCTTGGGGTAGATCTGAAAAAGATTAAAGATTGTGTTGGAGATCCTAATGCGGATGTTGACAATCCCGTTCTTAAGGCTGAACAGGATGCACAGATTGGCAAAGGCTCTCGGGGTGATGTTACTATATTGCCTACTCTTGTTATAAACAACAGACAGTATAGAGGTAAGTTGGAAAAAGGAGCAGTTCTCAAGGCTATCTGTGCAGGTTTCCAAGAAACCACTGAGCCTGCTATTTGCTTAACTCCAGATATGGAAACAAATGAGTGTTTGGAAAACAATGGTGGTTGCTGGCAGGACAAATCTACTAATATCACTGCATGCAGGGATACTTTCCGAGGAAGAGTGTGTGAATGCCCTATTGTTCAAAATGTCAAGTTTGTTGGTGATGGATATACACACTGTGAAGCCTCAGGAACCTTGCGCTGTGAACTCAACAATGGAGGTTGTTGGAAGGAAACCCGAGGTGGTAGAATGTACTCTGCTTGTGTCGATGATCATACCAAAGGTTGCAAATGTCCCCCTGGATTCAAGGGTGATGGAGTCCACTCCTGTGAAGATGTGGATGAGTGTGAAGAGAAGTTGGCCTGCCAGTGCCCAGAGTGCAAATGCAAAAATATCTGGGGGAGTTATGAGTGCAGCTGCAGTGGCAATTTGGTCCACATGCAAGAAAGTGACACGTGTATTGCTAAATATAGCTCTTCAAGGACCACCGGGGGTTTTATTTGGATGATGATTTTCATCTTGGCTGCTGTTAGTGCTGGGGGATATGCGTTTTACAAGTACAGAGTCCAGAGCTACATGGATTCTGAGATAAGGGCAATTATGGCCCAATACATGCCCTTGGATAACGAAGCAGAGGTCCCTAACAATCAAGTTCATCATGACATCTAG 1875 0.4389 MRDKLSFLLGVWIFLCGCCAGRFVVEKNNLKVTAPKSLRGVYECAIGNFGVPKYGGAMIGSVVYPNTNQRGCKSFYDDTLFKSKPGSFPVVLLVDRGDCYFTLKAWNAQNGGAAAILVADDRLEPLITMDTPEEGSVANDEYVQKISIPSALISKSLGDSIKKALSNGEMVTINLDWSETLPHPDERVEYEYWTNSNDECGPKCDSQINFAKNFKGAAQLLEQKGFTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDPEQDLSRGYDGKDVVVQNLRQACFFKVANESGKPWQWWDYVTDFAIRCPMKENKYTEGCSDQVIKSLGVDLKKIKDCVGDPNADVDNPVLKAEQDAQIGKGSRGDVTILPTLVINNRQYRGKLEKGAVLKAICAGFQETTEPAICLTPDMETNECLENNGGCWQDKSTNITACRDTFRGRVCECPIVQNVKFVGDGYTHCEASGTLRCELNNGGCWKETRGGRMYSACVDDHTKGCKCPPGFKGDGVHSCEDVDECEEKLACQCPECKCKNIWGSYECSCSGNLVHMQESDTCIAKYSSSRTTGGFIWMMIFILAAVSAGGYAFYKYRVQSYMDSEIRAIMAQYMPLDNEAEVPNNQVHHDI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1281 624 FunFam Vacuolar-sorting receptor 1 20 184 - -
Lele38g1281 624 FunFam vacuolar-sorting receptor 1 407 463 - -
Lele38g1281 624 Pfam PA domain 60 161 IPR003137 -
Lele38g1281 624 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 11 614 IPR042773 -
Lele38g1281 624 Gene3D - 20 184 - -
Lele38g1281 624 SUPERFAMILY PA domain 91 171 IPR046450 -
Lele38g1281 624 SMART egfca_6 514 556 IPR001881 GO:0005509
Lele38g1281 624 Gene3D Laminin 468 551 - -
Lele38g1281 624 Gene3D Laminin 408 453 - -
Lele38g1281 624 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lele38g1281 624 ProSitePatterns Calcium-binding EGF-like domain signature. 514 540 IPR018097 GO:0005509
Lele38g1281 624 CDD EGF_CA 514 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1281 Lele-ChrLele38 23598047 23603140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1281 4 622 Miscellaneous Gene Families AT3G52850 72.026 0.0 949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1281 38 23598047 23603140 Lele41g0273 41 2228557 2231368 CCT
Lele38g1281 38 23598047 23603140 Lele42g0268 42 2273784 2279732 CCT
Lele38g1281 38 23598047 23603140 Lele43g1095 43 19371384 19380567 CCT
Lele38g1281 38 23598047 23603140 Lele44g1081 44 19489369 19495610 CCT