Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0273 ATGGGGCTTTGCCTCGGTAAGTCTCTAGCTAAGGATGATGATTCTGATCATCATGTGGAGTTGGCTTCTGGAAACGTACAACTTATTACCAGTAAAGAATCATGGGATCAAAAGTTGGAAGAAGCAACAAGGGATGGCAGAATTGTGATTGCAAATTTCAGTGCTACGTGGTGTGGTCCTTGTAAGACAATTGCACCGTATTACAGCGAATTATCTGAGAAGTACCCGTCTTTGATGTTCTTGTTAATTGACGTGGATGAACTAGCTGACTTTAGCACTTCATGGGACATCAAAGCCACACCAACGTTCTTCTTTCTCAAAAATGGACAACAGATTGACAAACTTGTCGGAGCCAACAAGCCAGAGCTGCAGAAGAAGGTCAATGCCATTGTTGAACCAATCCCCAGTTCCTAG 414 0.4324 MGLCLGKSLAKDDDSDHHVELASGNVQLITSKESWDQKLEEATRDGRIVIANFSATWCGPCKTIAPYYSELSEKYPSLMFLLIDVDELADFSTSWDIKATPTFFFLKNGQQIDKLVGANKPELQKKVNAIVEPIPSS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0273 137 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Lele41g0273 137 PRINTS Thioredoxin family signature 57 66 - -
Lele41g0273 137 PRINTS Thioredoxin family signature 96 107 - -
Lele41g0273 137 PRINTS Thioredoxin family signature 49 57 - -
Lele41g0273 137 Gene3D Glutaredoxin 1 135 - -
Lele41g0273 137 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Lele41g0273 137 PANTHER THIOREDOXIN 26 128 - -
Lele41g0273 137 CDD TRX_family 39 128 - -
Lele41g0273 137 FunFam Thioredoxin H9 1 137 - -
Lele41g0273 137 Pfam Thioredoxin 29 128 IPR013766 -
Lele41g0273 137 SUPERFAMILY Thioredoxin-like 20 131 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0273 Lele-ChrLele41 2228557 2231368 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1281 38 23598047 23603140 Lele41g0273 41 2228557 2231368 CCT
Lele41g0273 41 2228557 2231368 Lele41g0273 41 2228557 2231368 ECH
Lele41g0273 41 2228557 2231368 Lele43g1095 43 19371384 19380567 hybridization
Lele41g0273 41 2228557 2231368 Lele44g1081 44 19489369 19495610 hybridization