Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1081 ATGCGATATCATGATGCAAAGACTCCAACAAGATGTTTTCGTTCTTTCTCTGCTTCGCGCTTTGCAATCACAATCAGATCCATCGCAATTCACAGCTCTGCTAAAATTCCTTTTTTGATGTATGTTTATGAGGCCCCTTCTTCTCGATCTCAGGATGATGATTCTGATCATCATGTGAAGTTGGCTTCTGGAAACGTACAACTTATCACCAGCAAAGAATCGTGGGATCAAAAGTTGGCAGAAGCAACAAGGGATGGCAGAATTGTGATTGCAAATTTCAGTGCCACATGGTGTGGTCCTTGTAAGACAATGGCACCATATTACAGTGAATTATCTGAGAAATACCCATCTTTGATGTTCTTGTTGATTGACGTGGATGAACTAGCTGACTTTAGCACTTCGTGGGACATTAAAGCCACTCCAACGTTCTTCTTTCTCAAAAATGGACAACAGATTGACAAACTTGTCGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATCAATGCCATTGCTGAACCAATCTCCTAG 528 0.4205 MRYHDAKTPTRCFRSFSASRFAITIRSIAIHSSAKIPFLMYVYEAPSSRSQDDDSDHHVKLASGNVQLITSKESWDQKLAEATRDGRIVIANFSATWCGPCKTMAPYYSELSEKYPSLMFLLIDVDELADFSTSWDIKATPTFFFLKNGQQIDKLVGANKPELQKKINAIAEPIS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1081 175 SUPERFAMILY Thioredoxin-like 58 170 IPR036249 -
Lele44g1081 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Lele44g1081 175 FunFam Thioredoxin 62 172 - -
Lele44g1081 175 PANTHER THIOREDOXIN 66 168 - -
Lele44g1081 175 Pfam Thioredoxin 69 168 IPR013766 -
Lele44g1081 175 Gene3D Glutaredoxin 44 174 - -
Lele44g1081 175 PRINTS Thioredoxin family signature 89 97 - -
Lele44g1081 175 PRINTS Thioredoxin family signature 97 106 - -
Lele44g1081 175 PRINTS Thioredoxin family signature 136 147 - -
Lele44g1081 175 ProSiteProfiles Thioredoxin domain profile. 39 172 IPR013766 -
Lele44g1081 175 CDD TRX_family 73 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1081 Lele-ChrLele44 19489369 19495610 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1281 38 23598047 23603140 Lele44g1081 44 19489369 19495610 CCT
Lele44g1081 44 19489369 19495610 Lele44g1081 44 19489369 19495610 ECH
Lele41g0273 41 2228557 2231368 Lele44g1081 44 19489369 19495610 hybridization
Lele42g0268 42 2273784 2279732 Lele44g1081 44 19489369 19495610 hybridization