Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0268 ATGCTATATCATGATACAAAGACTCCAACAAGATGTTATTTGTGTCATGCTTGCCTTATCTTATTTGTTGAATCAATATTTTTCTGGGATTCCTCCTCGAATCTTCTAATTAGGTTTTCGTTCTTTCTCTGCTTCGCGCTTTGCAATCACAATCAGATCCATCGCAATTCACAGCAATTCGACATTGAAGGTTACAAATTCATTCCTCTGAAACCAAGTATGGGGCTTTGCCTCTGTAAGCTTATGAATGAGTTTTCTTTGTGTTGTGTGAATGTGCGTTTCTCTTTGGCTGAAAGTTTCTACTTGCGTCAGCCTCAATCAGATGAAGCTTTACATCTTCCACCCACTTATGTAAACTCCATTGTAGTCAATGGTCTTAGTACAAATGGCACTGTTGGCGTCTTGGCAACTAAGAAAAGGAGTTGCCAAAAGCCTACTGAATCACCTCGATCTCAGGGTGATGATTCTGATCATCATGTGGAGTTGACTTCTGGAAACGTACAACTTATCACCAGCAAAGAATCGTGGGATCAAAAGTTGGCAGAAGCAACAAGGGATGGCAGAATTGTGATTGCAAATTTCAGTGCCACATGGTGTGGTCCTTGTAAGACAATTGCACCATATTACAGTGAATTATCTGAGAAATTCCCATCTTTGATGTTCTTGTTGATTGACGTGGATGAACTAGCTGACTTTAGCACTTCGTGGGACATTAAAGCCACTCCAACGTTCTTCTTTCTCAAAAATGGACAACAGATTGACAAACTTGTCGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATCAATGCCATTGCTGAACCAATCTCCTAG 831 0.4091 MLYHDTKTPTRCYLCHACLILFVESIFFWDSSSNLLIRFSFFLCFALCNHNQIHRNSQQFDIEGYKFIPLKPSMGLCLCKLMNEFSLCCVNVRFSLAESFYLRQPQSDEALHLPPTYVNSIVVNGLSTNGTVGVLATKKRSCQKPTESPRSQGDDSDHHVELTSGNVQLITSKESWDQKLAEATRDGRIVIANFSATWCGPCKTIAPYYSELSEKFPSLMFLLIDVDELADFSTSWDIKATPTFFFLKNGQQIDKLVGANKPELQKKINAIAEPIS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0268 276 ProSiteProfiles Thioredoxin domain profile. 149 273 IPR013766 -
Lele42g0268 276 PANTHER THIOREDOXIN 167 269 - -
Lele42g0268 276 Gene3D Glutaredoxin 143 275 - -
Lele42g0268 276 ProSitePatterns Thioredoxin family active site. 191 209 IPR017937 -
Lele42g0268 276 MobiDBLite consensus disorder prediction 139 159 - -
Lele42g0268 276 FunFam Thioredoxin 163 273 - -
Lele42g0268 276 CDD TRX_family 174 269 - -
Lele42g0268 276 Pfam Thioredoxin 170 269 IPR013766 -
Lele42g0268 276 PRINTS Thioredoxin family signature 190 198 - -
Lele42g0268 276 PRINTS Thioredoxin family signature 198 207 - -
Lele42g0268 276 PRINTS Thioredoxin family signature 237 248 - -
Lele42g0268 276 SUPERFAMILY Thioredoxin-like 160 271 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0268 Lele-ChrLele42 2273784 2279732 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1281 38 23598047 23603140 Lele42g0268 42 2273784 2279732 CCT
Lele42g0268 42 2273784 2279732 Lele42g0268 42 2273784 2279732 ECH
Lele42g0268 42 2273784 2279732 Lele43g1095 43 19371384 19380567 hybridization
Lele42g0268 42 2273784 2279732 Lele44g1081 44 19489369 19495610 hybridization