Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0296 ATGGCATCGAAAGCCCTTTTCCAAAATGGAACTTCATTGTTGAAGCGGCTTTCGAACTCGTTACTTCACCGAAGTTCGCATTCGAATCATCAAAATGTATCGCCTGCCCTTGAAATTGCTCCCAAGTTATTCCTTTCCGTCTCCAAGCTCCCTACTTCTCTACACCTTCCACAAAATGAGGCCGACTCGCTGAAAAAGTTCGCCCCTGAGAGATTCCTGTACCCTTGTGGCCTTCCCTCTCTCCCATTCTTCTTACCCGATGGGGATACTTCTTCATCAGAGAACCCAATGCTTTTATTCCCCAAAAGGACATTCCAACCTAGTCTTATCCGGCGAAAGAGGAATCATGGTTTTTTCTCTCGGAAGGCAACCAAGGGTGGCAGAAGAGTCATTGCTCGAAGAATAGCAAAAGGACGGTCGAGGATTACAGCTTAG 435 0.469 MASKALFQNGTSLLKRLSNSLLHRSSHSNHQNVSPALEIAPKLFLSVSKLPTSLHLPQNEADSLKKFAPERFLYPCGLPSLPFFLPDGDTSSSENPMLLFPKRTFQPSLIRRKRNHGFFSRKATKGGRRVIARRIAKGRSRITA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0296 144 FunFam Mitochondrial ribosomal protein L34 99 144 - -
Lele37g0296 144 Hamap 50S ribosomal protein L34 [rpmH]. 101 144 IPR000271 GO:0003735|GO:0005840|GO:0006412
Lele37g0296 144 Pfam Ribosomal protein L34 102 144 IPR000271 GO:0003735|GO:0005840|GO:0006412
Lele37g0296 144 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER 1 144 IPR000271 GO:0003735|GO:0005840|GO:0006412
Lele37g0296 144 Gene3D - 100 144 - -
Lele37g0296 144 ProSitePatterns Ribosomal protein L34 signature. 102 121 IPR020939 GO:0003735|GO:0005840|GO:0006412
Lele37g0296 144 TIGRFAM rpmH_bact: ribosomal protein bL34 102 144 IPR000271 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0296 Lele-ChrLele37 2504861 2507186 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0296 37 2504861 2507186 Lele41g0970 41 19161026 19174406 CCT
Lele37g0296 37 2504861 2507186 Lele42g0939 42 22102637 22111871 CCT
Lele37g0296 37 2504861 2507186 Lele43g0426 43 3752355 3762002 CCT
Lele37g0296 37 2504861 2507186 Lele44g0418 44 3093523 3097372 CCT
Lele37g0296 37 2504861 2507186 Lele39g1128 39 19782224 19784469 hybridization