Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0418 ATGCTTGTCCAACCAGCATTCCAAACTGTGCTGGGACATATAAGGTCTGAAATTCTGGAAAAGTTCAAGGAAGCTCTTAACAAGGTTTTGAAAGGAGGCGAAGGGTTTTCTGCTGCCGCTAATAGATGCACAAAGTCTTTTATGGCTCAGTTTGATGAAGCTTGTTCAGATGTAGTAATTGAACAAGCAAACTGGGATACATCTAAGGCAAGGGAGAAACTCCACCGTGATATCGATGCACATGTTGCTTCTGTTCGTGCTGCTAAGCTCTCTGAACTTATTTCATCATATGAGGAAAAATTGAAAGACGCTTTGTCTGGACCCATTGAAGCTCTTCTGGATGGAGCTAATAGTGAAACATGGCCAGCAATAAGGAATCTTCTCAAGCGTGAGACTGAATCCGCCGTATCCGGCTTCTCTGCTGCACTTTCTGGGTTTGATATGAGTGAAGAAACAAGACGGAACATGATAACAAGTCTAGAGGATTGTGCAAAGGGGGTAGTAGAAGCAAAGGCTAGGGAAGAATCTGGAAGAGTTCTGATCCGTATGAAGGACAGGTTTACAACATTGTTTAGCCATGATTCTGATTCGATGCCTCGTGTTTGGACGGGGAAGGAAGATATTCGAGCCATCACCAAGACTGCGCGTTATGCTTGCTTGAAGTTGCTATCTGTTATGGCGGCTATTCGTTTAGATGCTGCTGCTACTGCTACTGCTGATAATATCGAGAAAACATTAACAGTTGCCTTGCTGGATCCTACAAGTTCTAAGAAAGATAGAAGCATTACAGCAGTTGATCCTTTGGCTTCAAGCTCCTGGGCAGAGGAGGCCAACAATCGTAGTAACAACTGGTTACCACCTCCATGGGCAATTGTTGCTTTACTTATTCTGGGATTCAATGAATTTGTGACACTTCTAAGAAACCCCCTGTATTTCGGTGTCATCTTCATTGGTTTTCTTCTCGGAAAAGCCCTATGGGTGCAGCTGGACATCTCCAATGAATTTCGCCATGGAATGCTTCCAGGAATGATATCCTTGTCTGCAAAGTTTCTTCCAACACTGTTCAGCATTATCAGAAACCTAGCAGAGCAGGCACAGAATCCTTCAACTAACAGCAACGAACCTCATCAGAGAAACCCGTCTAAAACCAATCACAATTCTATCACTTCCAGTAGCGATGATGACACTGTCTCTAGTGCTTCATCTAATGTAACTTCTTTGGACAAAGGACCCAAATATGAGTAG 1245 0.4345 MLVQPAFQTVLGHIRSEILEKFKEALNKVLKGGEGFSAAANRCTKSFMAQFDEACSDVVIEQANWDTSKAREKLHRDIDAHVASVRAAKLSELISSYEEKLKDALSGPIEALLDGANSETWPAIRNLLKRETESAVSGFSAALSGFDMSEETRRNMITSLEDCAKGVVEAKAREESGRVLIRMKDRFTTLFSHDSDSMPRVWTGKEDIRAITKTARYACLKLLSVMAAIRLDAAATATADNIEKTLTVALLDPTSSKKDRSITAVDPLASSSWAEEANNRSNNWLPPPWAIVALLILGFNEFVTLLRNPLYFGVIFIGFLLGKALWVQLDISNEFRHGMLPGMISLSAKFLPTLFSIIRNLAEQAQNPSTNSNEPHQRNPSKTNHNSITSSSDDDTVSSASSNVTSLDKGPKYE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0418 414 Pfam Sey1 three-helix bundle domain 281 363 IPR046758 -
Lele44g0418 414 Pfam Sey1 three-helix bundle domain 3 279 IPR046758 -
Lele44g0418 414 MobiDBLite consensus disorder prediction 366 408 - -
Lele44g0418 414 PANTHER PROTEIN SEY1 2 384 IPR008803 -
Lele44g0418 414 MobiDBLite consensus disorder prediction 366 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0418 Lele-ChrLele44 3093523 3097372 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0296 37 2504861 2507186 Lele44g0418 44 3093523 3097372 CCT
Lele41g0970 41 19161026 19174406 Lele44g0418 44 3093523 3097372 hybridization
Lele42g0939 42 22102637 22111871 Lele44g0418 44 3093523 3097372 hybridization