Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0644 ATGCCTCGGTCAGGGCGAACCAATGGATTAATTCCGAGCTCATTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCTTCTGGTGCTTCCACCGTTGCTCGGTCTGCAGCATCGGTTGCTTCTTCGATTCTTGATAGGGATAGTGACGCTGATCATGATCAGCTGTCAGCTTATGAAGCTCTGAACATTGCATATCTTGGTTTGCTTGTGCTGAATGGTGCAATAGATTTTACTTATGGCACTAGTTTTATATGTGATTTTTTCCTGTCTTCTCAAGATTCCAAGTTGGAGGGAGATATCATCCGGCAAGTTCTTCTTCTAGGCTATCGGACTGGGTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTGCAAGACCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGCTATCAAAACCAATTGCATCAAAGATATCAGAAGATAAGTTTGCAGACAGCCGTCCCCTGTTGGTTGTTTGTATTGATGGAATTTATGCTGGAGGCAGTAACAATCAGGATGGTTTTGTCTCCCCTCGCAATGGGAGCACTTTAAACAGCCATGACCACGTGAATGACATTTATCTGCCAACTACTGTTCAGTTTTGTTCTTTGAGATCCCAATCATATGTACATGTATTAAAGTTTAGATCAGCCATTTATTCTGTTAGGTGCAGTCCTCGTGTTGTTGCCGTTGCTCAATCCACTCAGATACACTGTTTCAATGCCAGTACATTAGAAAGGGAATATACTCTGCTTACCAATCCAATTGTCATGAGCTGTCCTGTTTCTGGAGGTATAGGGTATGGACCGCTGTCAGTGGGTCCTAGATGGCTGGCTTATAGTGGAAGCCCAGTTGTAGTCTCAAATTCTGGGCGTGTCAACCCTCAACATTTGACACCGTCAGCGAAATTTCCTGGTTCTTCTTCGAACGGGAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCAGGGATAGTCACACTCGGAGATATAGGGTATAAGAAGCTTTCTAGATACTGCTCTGAGCTACGACCTGATGGCAACGGTTCTTTACAATCTGTAAGCTCCATCTCAAAGGGCAACGGAATGAGTAATGGCCATTTGGGGGATTTGGGTAATATTGGAATGGTTTTACTTGGTGGTTTGATGTGTTGCTTAGTTGTTACAGAATTTTTTTTAGTACCAGCCCTTATCCTCGGTTCAAATCTAGACTCAATAAGTTCTAGACTCATCTTTACCGACACTTCTCTTTCTGGACATGGGAGGCTGTTTCAAGTCATTGTCAGAGACATTGTCAGTAAAAGTGTTGTTGCTCAATTCCGAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGCGGCACTATTTTAGTGACTGCATCAGTTCAGGGGCATAATATTAATGTTTTTAAGATAATACCTGGACACTCTGACAGTTTGGCATCTGATGGCAGTCCTACTTATGTTCATCTTTACAGGCTACAACGCGGCTTTACAAATGCAGTAATTCAAGAGATCAGTTTCAGTGATGACAGTAACTGGATTATGATTAGTTCCTCAAGAGGTACTAGCCATTTATTTGCAATAAATCCTCAAGGAGGATCTGCAAATATTCAGTCCTATGATCCAAGTTTTACATCAAAAAATGGTGGATTGGGTGTTATGACTGACCCAGCAGTTCGGTGGCCTCCTAATTCAAGTTTACAAAATCCTAAACAACAAAGTCTGCATGCAACTGGGCCGCCAATCATACTTTCCGTTGTATGCAGAATTAGAAGTGGAAATAATGGCTGGAGAAGCACCGTAAGTGGTGCGGCTGCTGCTGCAACGGGTAGGACAGGCTCCCAGTCTGGAGTTATTGCTTCGTCTTTTTGTAACGGCAAAGGGAGTGCCTCGCATGTTAATGGGAACTCTTTTAAGACAAAATATCACCTGTTGGTTTTTTCGTCCTCTTGTTCTATGATACAATATTCTCTGGGAACATCAATGGGTCAAGATCCAGTAGTTTCTGGATTAACCCAGGCTCATGAATCTGCATTAGAGTTTGACACAAGATTGGTTGTTGAGGCTATTAAGAAATGGAATATAGGCCAGAGACATAATCGAAGAGAGCGAGAAGATAATGTAGACATATATGGTGAAAATGGAACTTCGGATAGCAACAAAATATATCCTGTAGAGATGAAGGATGAGAATATCAATAACTGGAAACTCGAGAATGTAATCATGAAACTGAATTCTCATCCTAAGGAAGATCATTTGTATTTTTCAGAAGCAGAACTTCAGACTCACCAAGCTCAAACCCCAGTGTGAACTCCTACTGTAAATAGTGAAGTGGATGAACCACAGCTACATCTGAATTCTGGGATAAATGGAAAAGACACAATTCCAGAGAGAAGTAACTCAGACTCAACTGACTGGATGACAAATTATGACGGCAACGCTGTACACAAGACAGACGGCGACGTTGAAGGGGCAGAGTGGAATGATCATCTGGGATCACTAGAAACTAAGGCAGAGTGGAATGAGCATCTGGGATCACTAGAAACTAACGGCTTTGTAAATAAGAATGACACTGACAATGACACCCTGGAAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCAAACATGGAGGCTCAGGCTCAGGCTCAACTCAGGCCTGTTGTAAATAGTGACAAAGAAGGCTTGAAAATGGAGAATCACTTCGAAGAAGACAACGTCCACTAG 2769 0.4258 MPRSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASVASSILDRDSDADHDQLSAYEALNIAYLGLLVLNGAIDFTYGTSFICDFFLSSQDSKLEGDIIRQVLLLGYRTGFQVWDVEDSKNVQDLVSRHDGPVSFMQMLSKPIASKISEDKFADSRPLLVVCIDGIYAGGSNNQDGFVSPRNGSTLNSHDHVNDIYLPTTVQFCSLRSQSYVHVLKFRSAIYSVRCSPRVVAVAQSTQIHCFNASTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSAKFPGSSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLSRYCSELRPDGNGSLQSVSSISKGNGMSNGHLGDLGNIGMVLLGGLMCCLVVTEFFLVPALILGSNLDSISSRLIFTDTSLSGHGRLFQVIVRDIVSKSVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIIPGHSDSLASDGSPTYVHLYRLQRGFTNAVIQEISFSDDSNWIMISSSRGTSHLFAINPQGGSANIQSYDPSFTSKNGGLGVMTDPAVRWPPNSSLQNPKQQSLHATGPPIILSVVCRIRSGNNGWRSTVSGAAAAATGRTGSQSGVIASSFCNGKGSASHVNGNSFKTKYHLLVFSSSCSMIQYSLGTSMGQDPVVSGLTQAHESALEFDTRLVVEAIKKWNIGQRHNRREREDNVDIYGENGTSDSNKIYPVEMKDENINNWKLENVIMKLNSHPKEDHLYFSEAELQTHQAQTPVXTPTVNSEVDEPQLHLNSGINGKDTIPERSNSDSTDWMTNYDGNAVHKTDGDVEGAEWNDHLGSLETKAEWNEHLGSLETNGFVNKNDTDNDTLEANTCHEVVNNREHSNMEAQAQAQLRPVVNSDKEGLKMENHFEEDNVH 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0644 922 MobiDBLite consensus disorder prediction 796 822 - -
Lele32g0644 922 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 168 540 IPR011047 -
Lele32g0644 922 Pfam Breast carcinoma amplified sequence 3 590 780 IPR022175 -
Lele32g0644 922 MobiDBLite consensus disorder prediction 796 835 - -
Lele32g0644 922 MobiDBLite consensus disorder prediction 566 585 - -
Lele32g0644 922 SMART WD40_4 441 481 IPR001680 GO:0005515
Lele32g0644 922 SMART WD40_4 210 245 IPR001680 GO:0005515
Lele32g0644 922 SMART WD40_4 497 538 IPR001680 GO:0005515
Lele32g0644 922 Gene3D - 414 568 IPR015943 GO:0005515
Lele32g0644 922 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 4 386 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0644 Lele-ChrLele32 4019877 4025153 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0768 11 7748408 7749582 Lele32g0644 32 4019877 4025153 CCT
Lele12g0570 12 14147818 14149472 Lele32g0644 32 4019877 4025153 CCT
Lele29g0662 29 4137765 4143962 Lele32g0644 32 4019877 4025153 hybridization
Lele30g0736 30 11834407 11839655 Lele32g0644 32 4019877 4025153 hybridization