Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0736 ATGGCTCGGTCAGGGCGAACCAATGGATTAATTCCGAGCTCATTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCGTCTGGTGCTTCCACCGTTGCTCGGTCTGCAGCATCGGTTGCTTCTTCGATTCTTGATAGGGATAGTGACGCTGATCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGTTGGAGGGAGATGTCATCCGGCAAGTTCTTCTTCTAGGCTATCGAACTGGGTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTGCAAGACCTAGTTTCCAGACATGACGGTCCTGTTTCTTTTATGCAAATGCTATCAAAACCAATTGCATCAAAGATATCAGAAGATAAGTTTGCAGACAGCCGTCCGCTGTTGGTTGTTTGTACTGATGGAATTTATGCTGGAGGCAGTAACAATCAGGATGGTTTTGTCTCCCCTCGCAATGGGAGCACTTTAAACAGCCATGACCACGTGAATGGCATTTGTCTGCCAACTACTGTTCAGTTTTGTTCTTTGAGATCCCAATCATATGTACATGTATTAAAGTTTAGATCAGCCATTTATTCTGTTAGGTGCAGTCCTCGTGTTGTTGCCGTTGCTCAATCCACTCAGATACACTGTTTCAATGCCAGTACACTAGAAAGGGAATATACTCTGCTTACCAATCCAATTGTCATGAGCTGTCCTGTTTCTGGAGGTATAGGCTATGGACCACTGTCGGTGGGTCCTAGATGGCTGGCTTATAGTGGAAGCCCAGTTGTAGTCTCAAATTCTGGGCGTGTCAACCCTCAGCATTTGACACCTTCAGCGAGCTTTCCTGGTTTTTCTTCGAACGGGAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCAGGGATAGTCACACTCGGAGATATAGGGTATAAGAAGCTTTCTAGATACTGCTCTGAGCTACGACCTTATGGCAATGGTTCTTCACAATCTGTAAGCTCCATCTCAATGGGCAACGGAATGAGTAATGGCCATTTGGGGGATTTGGGTAATATTGGAATGGTCATTGTCAGAGACATTGTCAGTAAAAGTGTTGTTGCTCAATTCCGAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGCGGCACTATTTTAGTGACTGCATCAGTTCAGGGGCATAATATTAATGTTTTTAAGATAATACCTGGACACTCTGATAGTTTGGCATCTGATGGCAGTCCTACTTATGTTCATCTTTACAGGCTACAACGGGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGACAGTAACTGGATTATGATTAGTTCCTCAAGAGGTACTAGCCATTTATTTGCAATAAATCCTCTAGGAGGATCTGCAAATATTCAGTCCTATGATCCAAGTTTTACATCGAAAAATGGTGGATTGGGCATTATGACTGACCCAGCAGTTCGGTGGCCTCCTAATTCAAGTTTACAAAATCCTAAACAACAAAGTCTGCATGCAACTGGGCCGCCAATCATACTTTCTGTTGTATGCAGAATTAGAAGTGGAAATAATGGCTGGAGAAGCACCGTAAGTGGTGCAGCTGCTGCTGCAACGGGTAGGACAGGCTCCCAGTCTGGAGTTATTGCTTCGTCTTTTTGTAACGGCAAAGGGAGTGCCTCGCATGTTAATGGGAACTCTTTTAAGAGAAAATATCACCTGTTGGTTTTTTCGTCCTCTGGTTCTATGATACGATATGCTCTGGGAACATCAATGGGTCAAGATCCAGTAGTTTCTGGATTAACCCAGGCACATGAATCTGCATTAGAGTTTGACACAAGATTGGTTGTTGAGGCTATTCAGAAATGGAATATAGGCCAGAGACATAATCGAAGAGAGCGAGAAGATAATGTAGACATATATGGTGAGAATGGAACTTCGGATAGCAACAAAATATATCCTGTAGAGATGAAGGATGAGAATATCAAAAACTCGAAAGTCGAGAATGTAATCATGCAATTGAATTCTTATCCTAAGGAAGATCATTTGTATTTTTCAGAAGCAGAACTTCAGACCCACCAAGCTCAAACTCCAGTGTGGTCAAAGCGAGAGATATATTTTCATTCAATGGTGAAAGAGGAGGGCATAATGAGTGAAGAAACTGCTTCAGAAGGGGAAATTGAGATTGAAAAAATTCCAACGCATGTAATTGAATTTAGGGCCAAGGACTTAGTTCCGATCTTCGACCATCTTCAGCCACAAAATTTCCAACAAACAGGGACTCCTATTGTAAAGAGTGAAGTGGATGAACCACAGCTACATCTGAATTCTGGGATTAATGGAAAAGACACAATTCCAGAGAGAAGTAACTCAGACTCTACTGACCGGATGACAAATTATGACGGCAACGTTGTGCACAAGATAGACGGCGACGTTGAAGGGGCGGAGTGGAATGATCATCTGGGATCACTAGAAACTAACGGCTTTGTAAATAAGAATGACACTGACAATGACACCCGGGAAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCGAACATGGAGGCTCTGGCTCAACTCATGCCTGTTGTAAATAGTGACAAAGAAGGCTTGAAAATGGAGAATCACTTCGAAGAAGACGACGTCCACTCGAAATAA 2670 0.4315 MARSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASVASSILDRDSDADHDQVIWAGFDKLELEGDVIRQVLLLGYRTGFQVWDVEDSKNVQDLVSRHDGPVSFMQMLSKPIASKISEDKFADSRPLLVVCTDGIYAGGSNNQDGFVSPRNGSTLNSHDHVNGICLPTTVQFCSLRSQSYVHVLKFRSAIYSVRCSPRVVAVAQSTQIHCFNASTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSASFPGFSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLSRYCSELRPYGNGSSQSVSSISMGNGMSNGHLGDLGNIGMVIVRDIVSKSVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIIPGHSDSLASDGSPTYVHLYRLQRGFTNAVIQDISFSDDSNWIMISSSRGTSHLFAINPLGGSANIQSYDPSFTSKNGGLGIMTDPAVRWPPNSSLQNPKQQSLHATGPPIILSVVCRIRSGNNGWRSTVSGAAAAATGRTGSQSGVIASSFCNGKGSASHVNGNSFKRKYHLLVFSSSGSMIRYALGTSMGQDPVVSGLTQAHESALEFDTRLVVEAIQKWNIGQRHNRREREDNVDIYGENGTSDSNKIYPVEMKDENIKNSKVENVIMQLNSYPKEDHLYFSEAELQTHQAQTPVWSKREIYFHSMVKEEGIMSEETASEGEIEIEKIPTHVIEFRAKDLVPIFDHLQPQNFQQTGTPIVKSEVDEPQLHLNSGINGKDTIPERSNSDSTDRMTNYDGNVVHKIDGDVEGAEWNDHLGSLETNGFVNKNDTDNDTREANTCHEVVNNREHSNMEALAQLMPVVNSDKEGLKMENHFEEDDVHSK 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0736 889 Gene3D - 71 477 IPR015943 GO:0005515
Lele30g0736 889 SUPERFAMILY WD40 repeat-like 73 460 IPR036322 GO:0005515
Lele30g0736 889 MobiDBLite consensus disorder prediction 776 797 - -
Lele30g0736 889 SMART WD40_4 179 214 IPR001680 GO:0005515
Lele30g0736 889 SMART WD40_4 361 401 IPR001680 GO:0005515
Lele30g0736 889 SMART WD40_4 417 458 IPR001680 GO:0005515
Lele30g0736 889 Pfam Breast carcinoma amplified sequence 3 510 747 IPR022175 -
Lele30g0736 889 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 854 IPR045142 GO:0006914
Lele30g0736 889 MobiDBLite consensus disorder prediction 778 797 - -
Lele30g0736 889 FunFam Breast carcinoma-amplified sequence 3 280 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0736 Lele-ChrLele30 11834407 11839655 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0768 11 7748408 7749582 Lele30g0736 30 11834407 11839655 CCT
Lele12g0570 12 14147818 14149472 Lele30g0736 30 11834407 11839655 CCT
Lele30g0736 30 11834407 11839655 Lele31g0874 31 16246260 16251496 hybridization
Lele30g0736 30 11834407 11839655 Lele32g0644 32 4019877 4025153 hybridization