Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0768 ATGGCTACTTCTAAGAGGATTGAAGTCCAAACAGACAATCAAATTCCACATAAATGGATCATTTCTTTGGGAGAAGAGGTATTCAAGAGGTTCTTCAGCCAGGCTAATCCAACAGTACATAAAATTTTTGGTGATGGTTCACTTTTCAGTCCAATGTTGTTTGGCAAGTTCTTCGATCCTTCTGATGCCTTCCCTCTCTGGGAGTTCGAGTCAGATATCTTGTTATCAAACCTACGTAGTTCAGGACAAAGCACCGTGGACTGGAGTCAGACTGAACATGGTTACATATTAAAGGCAGAATTACCAGGAACTGGGAGGAATAGCATTCAAGTCCATGTTGATAATGGGAAGATTGTGGAAATTAGTGGGCGGTGGAAGCAGCAGACAAAAGCAAGTGATTGGAGGTGTGGCCACTGGTGGGAATATGGATATGTACGAAGGCTTGAGATGCCTGAAGATGCAGAATGGAGGAATATAGAGGCTCAGTTATATAACGACGTATTCTTAGAGATACGAATACCGAAGAGGCCACAGGGCTGTGATTCTCCACAAGGGAAAGATGGAGCTTCAAAAAATGCAGAGTCATCGGTGTAA 594 0.431 MATSKRIEVQTDNQIPHKWIISLGEEVFKRFFSQANPTVHKIFGDGSLFSPMLFGKFFDPSDAFPLWEFESDILLSNLRSSGQSTVDWSQTEHGYILKAELPGTGRNSIQVHVDNGKIVEISGRWKQQTKASDWRCGHWWEYGYVRRLEMPEDAEWRNIEAQLYNDVFLEIRIPKRPQGCDSPQGKDGASKNAESSV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0768 197 SUPERFAMILY HSP20-like chaperones 51 177 IPR008978 -
Lele11g0768 197 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 182 - -
Lele11g0768 197 MobiDBLite consensus disorder prediction 176 197 - -
Lele11g0768 197 Pfam Hsp20/alpha crystallin family 87 180 IPR002068 -
Lele11g0768 197 Gene3D - 25 184 IPR008978 -
Lele11g0768 197 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 77 192 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0768 Lele-ChrLele11 7748408 7749582 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0768 11 7748408 7749582 Lele29g0662 29 4137765 4143962 CCT
Lele11g0768 11 7748408 7749582 Lele30g0736 30 11834407 11839655 CCT
Lele11g0768 11 7748408 7749582 Lele31g0874 31 16246260 16251496 CCT
Lele11g0768 11 7748408 7749582 Lele32g0644 32 4019877 4025153 CCT
Lele11g0768 11 7748408 7749582 Lele11g0768 11 7748408 7749582 ECH
Lele09g0765 09 6018973 6020148 Lele11g0768 11 7748408 7749582 hybridization
Lele10g0695 10 5252749 5258504 Lele11g0768 11 7748408 7749582 hybridization