Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1367 ATGACTTCACTCAATAAACCCTCCACTCTTCTTACGTTCCAGCTTCTCGTAGCCGGAATCACGTTGGCCCTCGCAGCACCAAAGCCCAAGCTCTTCAGAGAATACATCGGAGCCGAAGCACCGTATGATGACGAAGCAGTTCAATCACATTACCTGGCTCTGTGGATAAAGTATGGGCACCTCATAGATTATGTCAACTTTCAGTTCTATGCATATCCCAAAGGGACGACGATAAGTGAATTTATGGGACACTTCGAGAGGCAAGTGAAGAATTACAGAGGAGGGAACGTGTTGGTGAGTTTTGGGACAGATCATAGTGGCGGCTTGAAACCAGAGCATGGCTTCTTTGAAGCATGTGATCAGCTTTCAAGCCAGGTCAAGCTTCATGGCATCTTCATTTGGTCTGCCGATGACTCGAAAAAATGCAATTTCCTCTACGAGATTCAGTCACAGACCTTGCTCAATACCATCTCATAA 477 0.4612 MTSLNKPSTLLTFQLLVAGITLALAAPKPKLFREYIGAEAPYDDEAVQSHYLALWIKYGHLIDYVNFQFYAYPKGTTISEFMGHFERQVKNYRGGNVLVSFGTDHSGGLKPEHGFFEACDQLSSQVKLHGIFIWSADDSKKCNFLYEIQSQTLLNTIS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1367 158 PANTHER CHITINASE 2-LIKE 40 155 - -
Lele31g1367 158 SUPERFAMILY (Trans)glycosidases 43 150 IPR017853 -
Lele31g1367 158 Gene3D Glycosidases 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1367 Lele-ChrLele31 19513744 19514609 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1215 09 21075325 21078770 Lele31g1367 31 19513744 19514609 CCT
Lele10g1190 10 23089421 23094316 Lele31g1367 31 19513744 19514609 CCT
Lele29g0186 29 1060687 1061412 Lele31g1367 31 19513744 19514609 hybridization
Lele30g1219 30 14918492 14941430 Lele31g1367 31 19513744 19514609 hybridization