Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1215 ATGGCATTGTTGCGATCGGTGGCCGTGAAAGGTGGAAAAGGATCATCTTTGTTCTTCAGCTTAAAACGGAGGTTAGTTCATGGTGCCCAACCCCTAAGCGTGCGAGCATTCTCGTCCGCCGAATCACCGCCGTCCAAGGCTGTTGTATACGAGCTTCACGGATCGCCTGACACCGTCACCAAGTTGATAGACCTTCCACCCGTTGAAATCAAAGAGAATGATGTGTGCGTCAAGATGCTTGCTGCTCCTATCAATCCCTCCGATATCAATAGGATTGAAGGTGTATATCCCGTGAGACCGCCTGTACCAGCTGTTGGTGGGTATGAAGGCATCGGAGAGGTGCATTCAGTGGGCTCTGCAGTTACAGCTCTATCTCCTGGTGATTGGGTTATTCCTTCTCCGCCCTCTTTTGGGACTTGGCAAACATATATTGTCAAAGATCAGAATGTGTGGCATAAAATAAATAAGGATGTACCTATAGAATATGCTGCTACAATTACTGTCAATCCTCTGACTGCCCTGAGGATGCTTGAAGATTACATTACTTTGAATTCAGGAGATGCTATTGTGCAAAATGGGGCTACAAGCATGGTTGGGAAGTGCGTGATTCAGATTGCACAGTCTCGTGGTATTCACAACATCAATATAGTAAGGGACAGGGCAGGGATTGATGAAGTAAAGGAAAAACTTAAGAAATTGGGAGCTGATGAAGTTTATACTGAGAGCCAGTTGGAAGTGAAGAACGTCAAGAGTCTCTTGGGTGATATACCTGAACCTTCATTGGGATTTAACTGCGTCGGTGGGAATTCTGCTTCCCGGGTTCTCAAATTTTTGAGACAGGGAGGAACGATGGTGACATATGGTGGAATGTCTAAAAAGCCTATCACAGTGTCAACTTCATCCTTCATATTTAAGGATCTTTCCTTGAGGGGATTCTGGTTGCAGAAGTGGATGACCACAGATAAAGCTGGAGAGAGCAGAAAAATGATTCACAGGCTTTTGGGTCTTGTACGAGATGGGAAGTTGAAATATGAGATGGAACTGGTTCCCTTTGACAATTTCAAGACAGCATTGGATAAGGCTCTTGGCAAACTCGGTAGCCAACCTAAACAAGTGATCATATTTTAA 1128 0.4486 MALLRSVAVKGGKGSSLFFSLKRRLVHGAQPLSVRAFSSAESPPSKAVVYELHGSPDTVTKLIDLPPVEIKENDVCVKMLAAPINPSDINRIEGVYPVRPPVPAVGGYEGIGEVHSVGSAVTALSPGDWVIPSPPSFGTWQTYIVKDQNVWHKINKDVPIEYAATITVNPLTALRMLEDYITLNSGDAIVQNGATSMVGKCVIQIAQSRGIHNINIVRDRAGIDEVKEKLKKLGADEVYTESQLEVKNVKSLLGDIPEPSLGFNCVGGNSASRVLKFLRQGGTMVTYGGMSKKPITVSTSSFIFKDLSLRGFWLQKWMTTDKAGESRKMIHRLLGLVRDGKLKYEMELVPFDNFKTALDKALGKLGSQPKQVIIF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1215 375 Gene3D - 167 343 - -
Lele09g1215 375 SUPERFAMILY GroES-like 46 204 IPR011032 -
Lele09g1215 375 SMART PKS_ER_names_mod 54 373 IPR020843 GO:0016491
Lele09g1215 375 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL 31 375 - -
Lele09g1215 375 CDD ETR 45 375 - -
Lele09g1215 375 Pfam Zinc-binding dehydrogenase 198 318 IPR013149 -
Lele09g1215 375 Gene3D - 47 359 - -
Lele09g1215 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 341 IPR036291 -
Lele09g1215 375 FunFam Enoyl-[acyl-carrier-protein] reductase 1, mitochondrial 167 343 - -
Lele09g1215 375 Pfam Alcohol dehydrogenase GroES-like domain 73 134 IPR013154 -
Lele09g1215 375 FunFam Enoyl-[acyl-carrier-protein] reductase, mitochondrial 47 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1215 Lele-ChrLele09 21075325 21078770 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1215 09 21075325 21078770 Lele29g0186 29 1060687 1061412 CCT
Lele09g1215 09 21075325 21078770 Lele30g1219 30 14918492 14941430 CCT
Lele09g1215 09 21075325 21078770 Lele31g1367 31 19513744 19514609 CCT
Lele09g1215 09 21075325 21078770 Lele11g1215 11 19273392 19276762 hybridization
Lele09g1215 09 21075325 21078770 Lele12g0105 12 876440 879629 hybridization