Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1190 ATGGGGTTTACCATATGGATCAGCTTCCTTAAAATGTGGCCTACCACAGTGGATCCGTTCGAATTTGAAGTGGGCCCAGAGGACAGCAGTTCTGAGCTGAGCAAGGTGGAGTATTCGTCCGAAAAATCCGTAGAGCAAAACATAGAGAGTGATGGCGTTGTTGCGATCGGTGGCCGTGAAAGGTGGAAAAGGATCATCTATGTTCTTCAGCTTAACACGGAGGTTAGTGTATATCCTGTGAGACCGCCAGTACCAGCTATTGGTGGGTATGAAGGCATCGGAGAGGTGCATGCAGTGGGCTCTGCAGTTACAGCTCTATCTCCTGGAGATTGGGTTATTCCTTCTCCGCCCTCTTTTGGGACTTGGCAAACATACATTGTCAAAGATCAGAATGTGTGGCACAAAATAAATAAGGATGTACCTATTGAATATGCTGCTACAATTACTGTCAATCCTTTGACTGCCCCAAGGATGCTTGAATATTACATTACTTTGAATTCAGGAGATGCTATTGTGCAAAATGGGGCTACAAGCATGGTTGGGAAGTGCGTCATTCAGATTGCACAATCTCGTGGGATTGATGAAGTAAAGGAAAAACTTAAGAAATTGGGAGCTGATGAAGTTTATACTGAGAGCCAGTTGGAAGTGAAGAACGTCAAGAGTCTCTTGGATGTTTCCTTGAGGGGATTCTGGTTGCAGAAGTGGATGACCGCAGATAAAGCTGGAGAGAGCAGAAAAATGATAGACAGGCTTTGGGGTCTTGTACGAGATGGGAAGTTGAAATATGAGATGGAGCTGGTTCCCTTCGACAATCTGCAGGGTAGGCACTCGGGTTAG 837 0.4564 MGFTIWISFLKMWPTTVDPFEFEVGPEDSSSELSKVEYSSEKSVEQNIESDGVVAIGGRERWKRIIYVLQLNTEVSVYPVRPPVPAIGGYEGIGEVHAVGSAVTALSPGDWVIPSPPSFGTWQTYIVKDQNVWHKINKDVPIEYAATITVNPLTAPRMLEYYITLNSGDAIVQNGATSMVGKCVIQIAQSRGIDEVKEKLKKLGADEVYTESQLEVKNVKSLLDVSLRGFWLQKWMTADKAGESRKMIDRLWGLVRDGKLKYEMELVPFDNLQGRHSG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1190 278 Gene3D - 224 261 - -
Lele10g1190 278 Gene3D - 149 223 - -
Lele10g1190 278 SUPERFAMILY GroES-like 78 172 IPR011032 -
Lele10g1190 278 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 259 IPR036291 -
Lele10g1190 278 CDD ETR 77 276 - -
Lele10g1190 278 Gene3D - 262 273 - -
Lele10g1190 278 Gene3D - 76 148 - -
Lele10g1190 278 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL 224 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1190 Lele-ChrLele10 23089421 23094316 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1190 10 23089421 23094316 Lele29g0186 29 1060687 1061412 CCT
Lele10g1190 10 23089421 23094316 Lele30g1219 30 14918492 14941430 CCT
Lele10g1190 10 23089421 23094316 Lele31g1367 31 19513744 19514609 CCT
Lele10g1190 10 23089421 23094316 Lele11g1215 11 19273392 19276762 hybridization
Lele10g1190 10 23089421 23094316 Lele12g0105 12 876440 879629 hybridization