Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0186 ATGGGTCGTGGCTGTGGAGACGCGAATATGTACAAGTTTTTTCTTTTGCCAGCAGTTCAATCTCATTACCTGGCTCTGTGGATAAAGTATGGGCATCTCATAGATTATGTCAACTTTCAGTTCTATGCATATCCCAAAGGGACGACGATAAGTGAATTTATGGGACACTTCGAGAGGCAAGTGAAGAATTACAGAGGAGGGAACGTGTTGGTGAGTTTTGGGACAGATCATAGTGGCGGCTTGAAACCAGAGCATGGCTTCTTTGAAGCATGTGATCAGCTTTCCCGCCACGGCAAGCTTCATGGCATCTTCATTTGGTCTGCCGATGACTCCAAAGAATTCAATTTCCGCTACGAGATTCAGTCACAGACCTTGCTCAATACCACCTCATAA 393 0.4529 MGRGCGDANMYKFFLLPAVQSHYLALWIKYGHLIDYVNFQFYAYPKGTTISEFMGHFERQVKNYRGGNVLVSFGTDHSGGLKPEHGFFEACDQLSRHGKLHGIFIWSADDSKEFNFRYEIQSQTLLNTTS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0186 130 Gene3D Glycosidases 9 129 - -
Lele29g0186 130 PANTHER CHITINASE 2-LIKE 18 127 - -
Lele29g0186 130 SUPERFAMILY (Trans)glycosidases 17 122 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0186 Lele-ChrLele29 1060687 1061412 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1215 09 21075325 21078770 Lele29g0186 29 1060687 1061412 CCT
Lele10g1190 10 23089421 23094316 Lele29g0186 29 1060687 1061412 CCT
Lele29g0186 29 1060687 1061412 Lele31g1367 31 19513744 19514609 hybridization