Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0874 ATGAGGAAAGATGACCATAAACTACATCAAGGAGGTGCAATGCCTCGGTCAGGGCGAACCAATGGATTGATTCCGAGCTCATTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCCTCTGGTGCTTCCACCGTTGCGCGGTCTGCAGCATCGGTTGCTTCTTCGATTCTTGATAGGGATAGTGACGGTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGTTGGAAGGAAATGTCACCCGGCAAGTTCTTCTTCTAGGCTATCGAACTGGGTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTCCAAGACCTAGCTTCCAGACATGACGGTCCAGTTGCTTTTATGCAAATGCTATCAAAACCAATTGCATCAAAGAGCTCAGAAGATAAGTTTGCAGACAGTCGTCCACTGTTGGTTGTCTGTACTGATGGAATTTATGCTGGAGGCAGTAACAATCAAGATGGTTTTGTCTCCCCTTGCAATGGGAGCACTTTAAATGGCCATGACCAAGTGAATGGCATTTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTACATGTATTAAAGTTTAGATCAGCTATTTATTCTGTTAGGTGCAGTTCTCGTGTTGTTGCCGTTGCTCAATCCACTCAGATCCACTGTTTCAATGCCACTACATTAGAAAGGGAATATACTCTGCTCACCAATCCAATTGTGATGAGCTGTCCTGTTTCCGGAGGTATAGGCTATGGACCACTGTCAGTGGGTCCTAGATGGCTGGCTTATAGTGGAAGCCCAGTTGTAGTCTCGAATTCTGGGCGTGTCAATCCTCAACATTTGACACCTTCTGTGAGCTTTCCTGGGTTTTCTTCGAATGGGAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCGGGGATAGTCACACTTGGAGATATAGGGTATAAGAAGCTTTATAGATACTGCTCTGAGCTACGACCTGATGGCAATGGTTCTTCATCATCCGTAAGCTCCATATCGAAGGGCAACGGAATCAGTAATGGCCATTTGGGAGATTTGGGTAATATTGGAATGGTCATTGTCAGAGACATTGTCAGTAAAAGTGTTGTTGCTCAATTCAGAGCCCACAAAAGTCCTATATCAGCCTTATGCTTTGATCCTAGCGGCACTATTTTAGTGACTGCATCAGTTCAGGGGCATAATATTAATGTTTTTAAGATGATACCTGGACAATCTGACAGTTTGGCATCTGATGGCGGTCCTACTTATGTACATCTTTACAGGCTACAACGCGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGACAGTAACTGGATTATGATTAGTTCCTCAAGAGGTACTAGCCATTTGTTTGCCATAAATCCTCTAGGAGGATCCGTAAATATTCAGTCCTATGATCCAAGTTTTACATCGAAAAATGGTGGATTGGTTGTCATGACTGACCCAGCAGTTGGTTGGCCTACTAATTCAAGTTTACAAATTCCTAAACAACAAAGTCTGCGTGCAACTGGGACGCCAATCACACTTTCTGTTGTATGCAGAATTAGAAATGGAAATAATGGCTGGAGAAGCACCGTAAGTGGTGCAGCCGCTGCTGCAACAGGTAGGACAAGCTCCCAGTTAGGAGTTATTGCTTCGTCTTTTTGTAATGGCAAAGGGTGTGCTTTGCATGTTGATGGGAACTCTTTTAAGACAAAATATCACCTGTTGGTTTTTTCGTCTTCTGGTTCTATGATACAATATGCTCTGGGCACATCAATGGTTCAAGATTCAGTAGTTTCTGGATTAACCCAGGCTCATGAATCTGCATTAGAGTTTGACACAAGATTGGTTGTTGAAGCTATTCAGAAATGGAATATAGGCCAGAGACACAATCGAAGAGAACGAGAAGATAACGTAGACATATATGGTGAAAATGGAACTTCGGATAGCAACAAAATATATCCTGTAGAGATGAAGGATGAGAATATCAATAACTCAAAACTCGAGAATGTAATCATGAAAGTGAATTCTCATCCTAAGGAAGAGCATCATTTGTATTTTTCAGAAGCAGAACTTCAGACCCACCAAGCTCAAACTCCATTGTGGTCAAAGCGAGAGATATATTTTCATTCAATGGTGAAAGAGGAGGGCGTATTGAGTGAAGAAACTACTTCAGAAGGAGAAATTCAGATTGAAAGAATTCCATCACATGTAATTGAATTTAGGGCCAAGGACTTAGTTCCGATCTTCGACTATCTTCAGCCACAAAATTTCCAACAAACAAGGACTCCTATTGCAAATAGTGAAGTGGATGAACCACAGCTACACCTGAATTCTGGGATTAATGGAAAACACACAATATCAGAGAGAAGTAACTCAGATTCTACTGACTGGATGACAAATTATGATGGGGGTGTTGTACGCAAGATAGATGGCGACATTGAAGGGGCGGAGTGGAGTGATCATCTGGGATTGCTAGAAACTAACGACTTTGTAAATAAGAATGACAATGACACCATCGTTGAAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCAAACATGGAGGCTCAACTCATGCCTGTAAATAGTGACTTAGAAGGCTTTAAAAAGGAGAATCACTTTGAAGACGACCACTTGAAGTGA 2694 0.4224 MRKDDHKLHQGGAMPRSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASVASSILDRDSDGDHDQVIWAGFDKLELEGNVTRQVLLLGYRTGFQVWDVEDSKNVQDLASRHDGPVAFMQMLSKPIASKSSEDKFADSRPLLVVCTDGIYAGGSNNQDGFVSPCNGSTLNGHDQVNGIYLPTTVQFYSLRSQSYVHVLKFRSAIYSVRCSSRVVAVAQSTQIHCFNATTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSVSFPGFSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLYRYCSELRPDGNGSSSSVSSISKGNGISNGHLGDLGNIGMVIVRDIVSKSVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKMIPGQSDSLASDGGPTYVHLYRLQRGFTNAVIQDISFSDDSNWIMISSSRGTSHLFAINPLGGSVNIQSYDPSFTSKNGGLVVMTDPAVGWPTNSSLQIPKQQSLRATGTPITLSVVCRIRNGNNGWRSTVSGAAAAATGRTSSQLGVIASSFCNGKGCALHVDGNSFKTKYHLLVFSSSGSMIQYALGTSMVQDSVVSGLTQAHESALEFDTRLVVEAIQKWNIGQRHNRREREDNVDIYGENGTSDSNKIYPVEMKDENINNSKLENVIMKVNSHPKEEHHLYFSEAELQTHQAQTPLWSKREIYFHSMVKEEGVLSEETTSEGEIQIERIPSHVIEFRAKDLVPIFDYLQPQNFQQTRTPIANSEVDEPQLHLNSGINGKHTISERSNSDSTDWMTNYDGGVVRKIDGDIEGAEWSDHLGLLETNDFVNKNDNDTIVEANTCHEVVNNREHSNMEAQLMPVNSDLEGFKKENHFEDDHLK 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0874 897 Pfam WD domain, G-beta repeat 378 407 IPR001680 GO:0005515
Lele31g0874 897 Gene3D - 81 485 IPR015943 GO:0005515
Lele31g0874 897 SMART WD40_4 374 414 IPR001680 GO:0005515
Lele31g0874 897 SMART WD40_4 430 471 IPR001680 GO:0005515
Lele31g0874 897 SMART WD40_4 192 227 IPR001680 GO:0005515
Lele31g0874 897 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 17 809 IPR045142 GO:0006914
Lele31g0874 897 SUPERFAMILY WD40 repeat-like 85 473 IPR036322 GO:0005515
Lele31g0874 897 MobiDBLite consensus disorder prediction 1 21 - -
Lele31g0874 897 Pfam Breast carcinoma amplified sequence 3 523 761 IPR022175 -
Lele31g0874 897 FunFam Breast carcinoma-amplified sequence 3 293 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0874 Lele-ChrLele31 16246260 16251496 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0768 11 7748408 7749582 Lele31g0874 31 16246260 16251496 CCT
Lele12g0570 12 14147818 14149472 Lele31g0874 31 16246260 16251496 CCT
Lele29g0662 29 4137765 4143962 Lele31g0874 31 16246260 16251496 hybridization
Lele30g0736 30 11834407 11839655 Lele31g0874 31 16246260 16251496 hybridization