Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1863 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAATAGAATCAATCCTCCAAGGGTCTCTGTGGACAATGGTACTTGTCATGATTGTACCCTAATCAAGGTTGATAGTGTTAACAAACCAGGAATTCTGCTGGAGGTTGTACAAATTCTCACTGACCTTGACCTCATAATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTATTTCATGTCACGGATCAGCAGGGAAAGATGATAACAGACAGCAAAACCATTGATTTCATAGAGAAGGCTCTAGGACCCAAGGGCCAGAGCAACGAGGGGGTGAAGAGTTGGCCGGGCAAACGGGTTGGCGTGCATTCGATTGGTGATCATACTGCTATTGAGCTCATTGGCAGAGATCGCCCAGGTCTTTTATCTGAGATCTCAGCTGTGATTGCCAGTCTCCACATTAACGTGGTTGCAGCTGAGGTTTGGACACATAATAGTCGAATCGCATGTGTTCTTTATGTGAATGATGCTACCAGCCGATCGGTTGACGCTCCTAACAGATTATCTCTCATGGAGGAACAGCTCAACCATATCCTACGTGGATGTGAGGATGATGACAAAGTAGCTCGCACCAGTTTCTCCATGGGTTTCACCCATATGGATCGGCGGCTCCACCAAATGCTGTTTGCTGATCGTGACTACGAATGTGCTGTGGTTACAACAGATGTTAGTTATCCTGCCTCTTTCAGGCCACAAATCACCATAGAGCATTGTGAGGAGAAAGGGTACTCAATTGTTAGTGTCAGGTGCAAAGATCGAGCGAAACTGATGTTCGACATCGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCCACTATTTCATCAGATGCCCCTTATGCATCCCAGGAATACTTTATCCGGCACATGGATGGATGCACACTTGATACAGAAGGAGAGAAAGAAAGAGTCATCAAGTGTATCGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGAGTGAGCCTGGAGCTTTGCGCAAAGGATAGAGTGGGTTTGCTATCAGAAGTGACGAGGATTCTAAGGGAGAATGGGCTGACGGTGTGCAGAGCAGGGGTGTCTACGGTAGGTGAGAAAGCAGTGAACGTGTTTTATGTGAGAGATGCTTCTGGGAATCCAGTGGACACGAAAGCCATAGAAGCTCTTAGGAAGGAGATAGGGGAAAGCATGATGATCAACGTGAAGAAGATACCGGGAGGCAATGCCAAAGCGCCCGAGAACCACCGAGGATGGGCTAAAACAGGCTTCTTCTTTGGCAATTGGCTCGAAAGGTTCTTGAATTGA 1347 0.4633 MATVCWPYFDPEYENFSNRINPPRVSVDNGTCHDCTLIKVDSVNKPGILLEVVQILTDLDLIITKAYISSDGGWFMDVFHVTDQQGKMITDSKTIDFIEKALGPKGQSNEGVKSWPGKRVGVHSIGDHTAIELIGRDRPGLLSEISAVIASLHINVVAAEVWTHNSRIACVLYVNDATSRSVDAPNRLSLMEEQLNHILRGCEDDDKVARTSFSMGFTHMDRRLHQMLFADRDYECAVVTTDVSYPASFRPQITIEHCEEKGYSIVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTVGEKAVNVFYVRDASGNPVDTKAIEALRKEIGESMMINVKKIPGGNAKAPENHRGWAKTGFFFGNWLERFLN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1863 448 SUPERFAMILY ACT-like 125 200 IPR045865 -
Lele27g1863 448 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Lele27g1863 448 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Lele27g1863 448 Pfam ACT domain 343 403 IPR002912 -
Lele27g1863 448 Pfam ACT domain 37 85 IPR002912 -
Lele27g1863 448 Pfam ACT domain 130 195 IPR002912 -
Lele27g1863 448 CDD ACT_ACR_4 341 412 - -
Lele27g1863 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 416 IPR040217 -
Lele27g1863 448 FunFam ACT domain repeat 6 341 418 - -
Lele27g1863 448 SUPERFAMILY ACT-like 32 105 IPR045865 -
Lele27g1863 448 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Lele27g1863 448 Gene3D - 128 210 - -
Lele27g1863 448 Gene3D - 338 417 - -
Lele27g1863 448 SUPERFAMILY ACT-like 339 408 IPR045865 -
Lele27g1863 448 CDD ACT_ACR_1 35 106 - -
Lele27g1863 448 CDD ACT_ACR_3 263 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1863 Lele-ChrLele27 23424155 23426549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1863 27 23424155 23426549 Lele01g0260 01 1479284 1483570 CCT
Lele27g1863 27 23424155 23426549 Lele02g0249 02 1411265 1414463 CCT
Lele27g1863 27 23424155 23426549 Lele03g0266 03 1457959 1462754 CCT
Lele27g1863 27 23424155 23426549 Lele04g0257 04 1521700 1524922 CCT
Lele25g0222 25 1313971 1317612 Lele27g1863 27 23424155 23426549 hybridization
Lele26g0234 26 1357035 1359297 Lele27g1863 27 23424155 23426549 hybridization