Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0222 ATGGTTGCCGTACGGTGGACAAAACAAGGGCGTGGGTTTAGTGATGAAGGTTGGGGGTGGTTCTTTGATGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAACAGAATCAATCCTCCAAGGGTCTCTGTGGACAATGCTACTTGTCATAATTGTACCCTAATCAAGGTTGATAGTGTTAACAAACCAGGAATTCTGCTGGAGGTTGTACAAATTCTCACTGACCTTGACCTCATAATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTATTTCATGCCACGGATCAGCAGGGAAAGAAGATAACAGACAGCAAAACCATTGATTTCATAGAGAAGGCTCTAGGACCCAAGGGCCAGAGCAACGAGGGGACGAAGAGTTGGCCGGGCAAACGGGTTGGCGTGCATTCGATTGGTGATCATACTGCTATTGACCTCATTGGCAGAGACCGCCCTGGTCTTTTATCTGAGATCTCAGCTGTGATTGCCAGTCTCCACATTAACGTGTTTGCAGCTGAAGTTTGGACTCATAATAGTCGAATCGCATGTGTTCTTCATGTGAATGATGCTACCAGCCGATCGGTTGACGCTCCTAACAGATTATCTCTCATGGAGGAGCAGCTCAACCATATCCTACGGGGATGTGAGGATGATGACAAAGCAGCTCGCACCAGTTTCTCCATGGGTTTCACCCATATGGATCGGCGGCTCCACCAAATGCTGTTTGCTGATCGTGACTACGAATGTGCTGTGGTGACAACAGATGTTAGTTATCCTGCCTCTTTCAGGCCACAAATCACAATAGAGCATTGTGAGGAGAAAGGGTACTCAATTGTTAGTGTCAGGTGCAAAGATAGAGCCAAACTGATGTTCGACATCGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCCTCTATTTCATCAGATGCCCCTTATGCATCCCAGGAATACTTTATCCGGCACATGGATGGATGCACACTTGATACAGAAGGAGAGAAAGAAAGGGTCATCAAGTGTATCGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGAGTGAGCCTGGAGCTGTGCGCAAAGGATAGAGTGGGTTTGCTATCAGAAGTGACGAGGATTCTGAGGGAGAATGGGCTGACGGTGTGCAGAGCAGGGGTGTCTACGGTAGGGGAGAAAGCAGTGAACGTGTTTTATGTGAGAGATGCTTCTGGGAATCAGGTGGACACGAAAGCCATAGAAGCTCTTAGGAAGGAGATAGGGGAAAGCATGATGATCAACGTGAAGAAGATACCGGGAGGCAATGCCAAAGCGCCCGAGAACAACCGAGGATGGGCTAAAACAGGCTTCTTCTTTGGCAATTGGCTCGAAAGGTTATTGAATTGA 1407 0.4691 MVAVRWTKQGRGFSDEGWGWFFDVCWPYFDPEYENFSNRINPPRVSVDNATCHNCTLIKVDSVNKPGILLEVVQILTDLDLIITKAYISSDGGWFMDVFHATDQQGKKITDSKTIDFIEKALGPKGQSNEGTKSWPGKRVGVHSIGDHTAIDLIGRDRPGLLSEISAVIASLHINVFAAEVWTHNSRIACVLHVNDATSRSVDAPNRLSLMEEQLNHILRGCEDDDKAARTSFSMGFTHMDRRLHQMLFADRDYECAVVTTDVSYPASFRPQITIEHCEEKGYSIVSVRCKDRAKLMFDIVCTLTDMQYVVFHASISSDAPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTVGEKAVNVFYVRDASGNQVDTKAIEALRKEIGESMMINVKKIPGGNAKAPENNRGWAKTGFFFGNWLERLLN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0222 468 Gene3D - 148 220 - -
Lele25g0222 468 ProSiteProfiles ACT domain profile. 363 440 IPR002912 -
Lele25g0222 468 CDD ACT_ACR_4 361 432 - -
Lele25g0222 468 ProSiteProfiles ACT domain profile. 57 134 IPR002912 -
Lele25g0222 468 SUPERFAMILY ACT-like 359 427 IPR045865 -
Lele25g0222 468 CDD ACT_ACR_1 55 126 - -
Lele25g0222 468 Gene3D - 358 437 - -
Lele25g0222 468 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 30 436 IPR040217 -
Lele25g0222 468 SUPERFAMILY ACT-like 145 220 IPR045865 -
Lele25g0222 468 CDD ACT_ACR_3 283 357 - -
Lele25g0222 468 Pfam ACT domain 153 203 IPR002912 -
Lele25g0222 468 Pfam ACT domain 57 105 IPR002912 -
Lele25g0222 468 Pfam ACT domain 363 423 IPR002912 -
Lele25g0222 468 ProSiteProfiles ACT domain profile. 150 233 IPR002912 -
Lele25g0222 468 FunFam ACT domain repeat 6 361 438 - -
Lele25g0222 468 SUPERFAMILY ACT-like 52 126 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0222 Lele-ChrLele25 1313971 1317612 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0222 25 1313971 1317612 Lele27g1863 27 23424155 23426549 hybridization
Lele25g0222 25 1313971 1317612 Lele28g0243 28 1415205 1417468 hybridization