Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1258 ATGGGAAAACGTTCTCAGAGTAGAAATGCTGCGATGTTGGATAGCGATGATGACGATTGTGTGAGCTTGTTCTCACCAGTCCGTTCTGCTCTCTTGGAGGTTTCAGGGGCTGAAGAAGTGCACTTAGATCAAGATAGTTTGCTTGACCGAGCTCTGGATGCTTTAGATGAGAAGAGGGGTTCGACAAGGGAGAATGCTTTGTCATTTATCGTTGAAGCATTCAATAACAATATGCAGTATCAGTTTGTGGAGAACAAATTTGCCACCCTATTGCATCATTGTGTTGGTTCAATGAGAACAGTATCCAAAAAGGCATCTGCAAAGGAGATTGCTCTGGCATCTCATGTCATTGGCTTGCTGATATTGACTGTTGGATATGGTGATAAAGCAAGTGAGATATTTGAAGAATCCATCCATTCTCTTCACGAATCTCTTTCATCTGGATCAGATGTTTCAAAGATATCATTGGTGGAGTGCTTGGCTATTATCACTTTTGTCGGAGGGAATGATCAAGAGGAGACTCAGAGATCAATGGACATGATGTGGCGGATAATTAATCCTAATAAACTTGGTTCAAATGTAGGTTCCTATTTCAAAAATATTTATGGTTTTACAGTCAAACCCTCTGCTCTGTTGATAACCATAGTGGTGTCTGCTTGGTCCTTTCTCCTCTCCACCATGGATGAAGTGAAGCTAAACTCTAGAACTTGGCGAAATTACATATCTTCTTTGTCTAGTCTGCTAGACAAGGAAGACCGATCTATACGTGAGGTTGCTGGTGAAGCACTGGCTCTAATGTTTGAGATTGGAGTTACTGAGAATTTGACTGCTGAACCTAAGAACGAAAGTGACATGATTGGATCACGGGAAAGTTACGCAAATATCCATGGATTGAAAGGGAAGATCATAAATCAAGTTAGAGACCTTTCAGTGGAGGCTGGCGGAAAAGGTTCTTCCAAGAAAGATCTTAACAGTCAGAAGATCTTGTTTCGAGATATCTTGGAGTTTTTTGAGCATGGTCGCTCTCCTGAAATTTCAATAAAGATTAATGGTGATTTGCCGCAGACATCTTCATGGTCCCAAGTGATACAGGTTGGCGTTCTTTTGGCAGTCTTTTATTATAATATACATTCTGGAAAGATTGTGTTTTCTGATTAG 1158 0.4067 MGKRSQSRNAAMLDSDDDDCVSLFSPVRSALLEVSGAEEVHLDQDSLLDRALDALDEKRGSTRENALSFIVEAFNNNMQYQFVENKFATLLHHCVGSMRTVSKKASAKEIALASHVIGLLILTVGYGDKASEIFEESIHSLHESLSSGSDVSKISLVECLAIITFVGGNDQEETQRSMDMMWRIINPNKLGSNVGSYFKNIYGFTVKPSALLITIVVSAWSFLLSTMDEVKLNSRTWRNYISSLSSLLDKEDRSIREVAGEALALMFEIGVTENLTAEPKNESDMIGSRESYANIHGLKGKIINQVRDLSVEAGGKGSSKKDLNSQKILFRDILEFFEHGRSPEISIKINGDLPQTSSWSQVIQVGVLLAVFYYNIHSGKIVFSD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1258 385 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 7 367 IPR039777 -
Lele27g1258 385 Pfam Interferon-related developmental regulator (IFRD) 34 338 IPR007701 -
Lele27g1258 385 SUPERFAMILY ARM repeat 45 268 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1258 Lele-ChrLele27 19409059 19411684 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1258 27 19409059 19411684 Lele01g0808 01 4680870 4685091 CCT
Lele27g1258 27 19409059 19411684 Lele02g0780 02 4770311 4774171 CCT
Lele27g1258 27 19409059 19411684 Lele03g0800 03 4680545 4684098 CCT
Lele27g1258 27 19409059 19411684 Lele04g0800 04 4904426 4908271 CCT
Lele25g0820 25 5275167 5278325 Lele27g1258 27 19409059 19411684 hybridization
Lele26g0832 26 5339050 5342421 Lele27g1258 27 19409059 19411684 hybridization