Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0832 ATGGCATCTTCCTTTCGCACGGACATCTTTTTCCATTTTGATGTCTCTTTCATCATCCAACTTAACCGTCTTCGCTTCCCTGGTCTGTCCCGTTTTTATTCGAGAAAAGGTTCTCAGCGTAGAAATGCTGCGATGTTGGATAGCGATGATGACGATTGTGTAAGCTTGTTCTCACCAGGCCGTTCTGCTCTCTTGGAGGTGTCAGGGGCTGAAGAAGTGCACGTAGATCAAGATAGCTTGCTCGACCGAGCTCTGGATGCTTTAGATGAAAAGAGGGGTTCCACAAGGGAGAATGCTTTGTCGTTTATCGTTGAAGCATTCAATAACAATATGCAGTATCAGTTTGTGGAGAACAAATTTGCCACCCTATTGCATCAGTGTGTTGGTTCAATAAGAAAAGGATCCAAAAAGGCATCTGCAAAGGAGATTGCTCTGGCATCTCATGTCATTGGCTTGCTGATATTGACTGTTGGATATGGTGATCAAGCACGTGAGATATTTGAAGAATCTATCCGTTCTCTGGACGAATCTCTTTCAACTGGATCAGATGTTTCAAAGATATCATTGGTGGAGTGCTCGGCTATTATCACTTTTGTTGGAGGGAATGATCAAGAGGAGACTCAGAGATCAATGGACATGATGTGGCGGATTATCAATCCTAAACTTGGTTCAAATGTAGTTACAGTCAAACCCTCTGCTCTGGTGATAACCATTGTGGTGTCTGCATGGTCCTTTCTCCTCTCCACCATGGATGAAGTGAAGCTAAATTCTAAAAGTTGGAGGAATTACATATCTTATTTGTCTAGTCTTCTAGACAAAGAAGACCGATCTATACGTAAAGTTGCTGGTGAAGCACTGGCTCTAATATTTGAGATTGGAGTCATTGAGAATTTGTCTGCTGAACCTAAGAGTGCAAGTGACATGATTGGAGATGAAAGTGAACCACGGGAAAGTTATGCACATATCCACGGATTGAAAGGGAAGGTCATAAATCAAGTTAGAGACCTTTCAGTGGAGGCTGGCGGAAAAGGTTCTTCCAAAAACGATCTTAACAGTCAGAAGATCTTGTTTCGAGATATCTTGGAGTTTTTTGAGCTTGGTCACTCTCCTGAAGTTTCAATGAAGATTAATGGTGATTTGCTTCAGACATCATCATGGCCCCAAGTGATACAATTAAACTTTCTCAAGCGTTTCTTGGGTGGAGGGTTTGTTAAGCACATGCAGGAAAATGATCTCCTTCATGATGTCTTCAACTTCATACCCAGGAGAAGGAACTTGAGTAACAGAGTACATCAAATGACCAAATGTGAAAAGAGAATGTTCAAGTCTTCAAACTCAATTTTAAACAAGGCAAGGACACAATCACTTAATAAGCAACGGATGTTATCTGAGGGCAGAAACTTGGACCATTACGCAGTGAATATGGTTGAAGAATTCATGAGCTATTGA 1449 0.4155 MASSFRTDIFFHFDVSFIIQLNRLRFPGLSRFYSRKGSQRRNAAMLDSDDDDCVSLFSPGRSALLEVSGAEEVHVDQDSLLDRALDALDEKRGSTRENALSFIVEAFNNNMQYQFVENKFATLLHQCVGSIRKGSKKASAKEIALASHVIGLLILTVGYGDQAREIFEESIRSLDESLSTGSDVSKISLVECSAIITFVGGNDQEETQRSMDMMWRIINPKLGSNVVTVKPSALVITIVVSAWSFLLSTMDEVKLNSKSWRNYISYLSSLLDKEDRSIRKVAGEALALIFEIGVIENLSAEPKSASDMIGDESEPRESYAHIHGLKGKVINQVRDLSVEAGGKGSSKNDLNSQKILFRDILEFFELGHSPEVSMKINGDLLQTSSWPQVIQLNFLKRFLGGGFVKHMQENDLLHDVFNFIPRRRNLSNRVHQMTKCEKRMFKSSNSILNKARTQSLNKQRMLSEGRNLDHYAVNMVEEFMSY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0832 482 Pfam Interferon-related protein conserved region 410 463 IPR006921 -
Lele26g0832 482 Pfam Interferon-related developmental regulator (IFRD) 67 365 IPR007701 -
Lele26g0832 482 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 40 471 IPR039777 -
Lele26g0832 482 SUPERFAMILY ARM repeat 76 293 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0832 Lele-ChrLele26 5339050 5342421 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0832 26 5339050 5342421 Lele01g0808 01 4680870 4685091 CCT
Lele26g0832 26 5339050 5342421 Lele02g0780 02 4770311 4774171 CCT
Lele26g0832 26 5339050 5342421 Lele03g0800 03 4680545 4684098 CCT
Lele26g0832 26 5339050 5342421 Lele04g0800 04 4904426 4908271 CCT
Lele26g0832 26 5339050 5342421 Lele27g1258 27 19409059 19411684 hybridization
Lele26g0832 26 5339050 5342421 Lele28g0817 28 5249582 5252056 hybridization