Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0808 ATGAGTGGTAGTTTATTACAACCCGCAAGTCGCCACCAAACCCCCGCTTCCCAGAAAGCCGTGGAAGGATGGAATCATCTTTTGCGTTGCGTCGAAGCTGGAAACGGCAAAGGCTGCCTTCTGCTCACGTGTAATTCTCAACGTAAAAATGCTGCGATGATGGATAGCGATGATGACAGTAGTAGCGTTAGTTCGTCGTCTACTATCCAGTCTGATCGCATGTCAGTGTTGGGTACTGAAGAAGTGCACATTGATCATGATACTTTGCTTGACAAAGCTCTCGATGCTTTAGATGAAAAGAGGGGTTCCACGAGGGAGAAAGCATTGTCATCGATCATTGACGCATTCAACAGCAATATGCAGCATCAGTTCGTTGAAAAGAAATTTGCTACTTTGTTGCATCAGTGTCTTGGTGCCATAAAAAAAGGATCCAAAAAGGCATCTGCAAACGAAATAGCCTTGGCATCTCGTGCCATTGGATTATTGGCCTTGACAGTTGGATGTGGTGATCATGCACGTGAAATATATGAAGAATCTGTTCGTCCTCTTGATGAATCTCTGACATCTGGGTCTGATTCCTCAAAGATATCATCTGTACGTAAGATTTTGAAAATCATGCTGGGTCTAGTGCATTTGGTGCGATGCTTGGCTATTATCACTTTTGTTGGTGGAACTGATCAAGAGGAAACAGAGAAGTCAATGGACATGATGTGGCGATTGATTAATCCTAAATTGGGTTCCAATGTTGTTTCAGTCAAACCTTCACCTTCGTTAATAATAGCTGTGGTATCTGCTTGGTCCTTTCTCCTCCCCACCATGGGCAAACTGAAACTAAACTCCAAAAGCTGGCAAAATTCAATAACTTATTTATCTAGTCTTCTAGATAAGGAAGACAGGTCTGTGCGCATTGTAGCTGGTGAAGCTTTAGCTTTAATATTTGAGGTTGGAGTTATAGAGAAATCTTCTGCTGGTCCTAACAATGCAAGCGACACTACTCAAGAAGAGAGCAAACGACATGAAAGTTATGTGCATATCCATGGATTAAAGGAGAAGGTCATCAATCAAGTTAAAAACCTTGCTGTGGAGGCTGGTGGAAAAGGTTCTGCAAAAAAAGATCTTAACACTCAGAAGGACTTGTTTCGAGATATCTCAGATTTTTTCGAGTATGGTTACTCTCCTGAAATTACAACAAAGATTGGCGGTGATTCACTGCAGACATCATCATGGTGTCAAATTATACAGTTAAACTTTTTCAAGCACTTCTTAGGGGGAGGGTTCATTAAGCACATGCAGGAAAATGAGTTCCTTCATGATGTTTTTGACTTCACACCAAAGGGAAGAAATCTTGTTGACAATGAACATCGGATGTCTGTTGGTGAAAAGAGAATGTTTAAGTCTCCGAATTCAGTTCTGAACAAGGCAAGGACCCAACTACTTAACAAGCAGCGGTTACAATCTGAGGGCAGGAACTTTGGTCATTTCGCAGTCAATGCGGTTGAAGAGGAGGCGTGA 1512 0.4206 MSGSLLQPASRHQTPASQKAVEGWNHLLRCVEAGNGKGCLLLTCNSQRKNAAMMDSDDDSSSVSSSSTIQSDRMSVLGTEEVHIDHDTLLDKALDALDEKRGSTREKALSSIIDAFNSNMQHQFVEKKFATLLHQCLGAIKKGSKKASANEIALASRAIGLLALTVGCGDHAREIYEESVRPLDESLTSGSDSSKISSVRKILKIMLGLVHLVRCLAIITFVGGTDQEETEKSMDMMWRLINPKLGSNVVSVKPSPSLIIAVVSAWSFLLPTMGKLKLNSKSWQNSITYLSSLLDKEDRSVRIVAGEALALIFEVGVIEKSSAGPNNASDTTQEESKRHESYVHIHGLKEKVINQVKNLAVEAGGKGSAKKDLNTQKDLFRDISDFFEYGYSPEITTKIGGDSLQTSSWCQIIQLNFFKHFLGGGFIKHMQENEFLHDVFDFTPKGRNLVDNEHRMSVGEKRMFKSPNSVLNKARTQLLNKQRLQSEGRNFGHFAVNAVEEEA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0808 503 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 48 497 IPR039777 -
Lele01g0808 503 Gene3D - 57 334 IPR011989 -
Lele01g0808 503 Pfam Interferon-related protein conserved region 433 483 IPR006921 -
Lele01g0808 503 SUPERFAMILY ARM repeat 59 314 IPR016024 -
Lele01g0808 503 Pfam Interferon-related developmental regulator (IFRD) 61 388 IPR007701 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0808 Lele-ChrLele01 4680870 4685091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0820 25 5275167 5278325 Lele01g0808 01 4680870 4685091 CCT
Lele26g0832 26 5339050 5342421 Lele01g0808 01 4680870 4685091 CCT
Lele27g1258 27 19409059 19411684 Lele01g0808 01 4680870 4685091 CCT
Lele01g0808 01 4680870 4685091 Lele03g0800 03 4680545 4684098 hybridization
Lele01g0808 01 4680870 4685091 Lele04g0800 04 4904426 4908271 hybridization