Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0800 ATGGGAAAGCGTAATTCTCAACGTAAAAATGCTGCAATGATGGATAGCGATGATGAAAGTAGTAGTGTTAGTTCGTCGTCTACTATCCGGTCCGATCGGATGTCAGTGTCAGGTACTGAAGAAGTGCACGTTGATCAAGATGCTTTGCTTGACAGAGCTCTCGATGCTTTAGATGAAAAGAGGGGTTCCACGAGGGTGAAAGCATTGTCCTCGATCATTGAGGCATTCAACAGCAGTATGCAGCATCAGTTCGTCGAAAAGAAATTTGCTACCTTGTTGCATCAGTGTCTTGGTTCCATTAAAAAAGGATCCAAAAAGGCATCTGCAAACGAAATAGCCTTGGCATCTCATGCCATTGGTTTATTGGCCTTGACAGTTGGATGTGGGGATAATGCACGTGAAATATATGAAGAATCTGTTCGTCCTCTTGATGAATCTCTGACATCTGGGTCGGATGCCTCAAAGATATCATCTCTGGTGCGGTGCTTGGCTATTATCACTTTTGTTGGTGGGACTGATCAAGAGGAAACAGAGAAGTCAATGGACATGATGTGGCGATTGATTAATCCTAAATTGGGTTCCAATGGTGTTTCAGTCAAACCTTCTCCTTCGTTAATAACAACTGTGGTATCTGCTTGGTCCTTTCTCCTCTCCTCCATGGGCAAACTGAAACTAAACTCCACAAGCTGGCAAAATTCAATAACTTACTTATCTAGTCTTCTAGACAAGGAAGACAGGTCTGTGCGCATTGTAGCTGGTGAAGCTTTAGCTTTAATTTTTGAGGTTGGAGTTATAGAGAAATCTTCTGCTGGTCCTAACAGTACGAGCAACACTACTCAAGAAGAGAGCAAACCACATGAAAGTTATGTGCATATCCATGGATTAAAGGGGAAGGTCATCAATCAAGTTAAAAACCTTGCTGTGGAGGCTGGTGGAAAAGGCTCTGCAAAAAAAGATCTTAACATTCAGAGGGACTTGTTTCGAGATATCTCAGATTTTTTTGTGTATGGTTACTCTCCTGAAATTACAACAAAGATTGGCGGCGATTCACTGCAGACATCATCATGGTCTCAAATGATACAGTTAAACTTTTTCAAGCACTTCTTAGGGGGAGGGTTCATTAGGCACATGCAGGAAAATGAGTTGCTTCATGATGTTTTTGACTTCACACCAAAGAGAAGAAATCTTGTTGACAATGAACATCGGATGTCTGTTGGTGAAAAGAGAATGTTTAAGTCTCCGAATTCAGTCCTGAACAAGGCAAGAACCCAACTACTTAACAAGCAGCGGTTACAATCTGAGGGCAGGAACTTTGGTCACTACGCAGTCAATGCGTTGGAAGAGGAGTCGTGA 1353 0.4228 MGKRNSQRKNAAMMDSDDESSSVSSSSTIRSDRMSVSGTEEVHVDQDALLDRALDALDEKRGSTRVKALSSIIEAFNSSMQHQFVEKKFATLLHQCLGSIKKGSKKASANEIALASHAIGLLALTVGCGDNAREIYEESVRPLDESLTSGSDASKISSLVRCLAIITFVGGTDQEETEKSMDMMWRLINPKLGSNGVSVKPSPSLITTVVSAWSFLLSSMGKLKLNSTSWQNSITYLSSLLDKEDRSVRIVAGEALALIFEVGVIEKSSAGPNSTSNTTQEESKPHESYVHIHGLKGKVINQVKNLAVEAGGKGSAKKDLNIQRDLFRDISDFFVYGYSPEITTKIGGDSLQTSSWSQMIQLNFFKHFLGGGFIRHMQENELLHDVFDFTPKRRNLVDNEHRMSVGEKRMFKSPNSVLNKARTQLLNKQRLQSEGRNFGHYAVNALEEES 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0800 450 Pfam Interferon-related developmental regulator (IFRD) 21 333 IPR007701 -
Lele04g0800 450 MobiDBLite consensus disorder prediction 1 40 - -
Lele04g0800 450 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 7 444 IPR039777 -
Lele04g0800 450 SUPERFAMILY ARM repeat 46 261 IPR016024 -
Lele04g0800 450 MobiDBLite consensus disorder prediction 16 35 - -
Lele04g0800 450 Gene3D - 17 272 IPR011989 -
Lele04g0800 450 Pfam Interferon-related protein conserved region 380 430 IPR006921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0800 Lele-ChrLele04 4904426 4908271 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0820 25 5275167 5278325 Lele04g0800 04 4904426 4908271 CCT
Lele26g0832 26 5339050 5342421 Lele04g0800 04 4904426 4908271 CCT
Lele27g1258 27 19409059 19411684 Lele04g0800 04 4904426 4908271 CCT
Lele01g0808 01 4680870 4685091 Lele04g0800 04 4904426 4908271 hybridization
Lele02g0780 02 4770311 4774171 Lele04g0800 04 4904426 4908271 hybridization