Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0820 ATGGGAAAACGTTCTCTGCGTAGAAATGCTGCGATGTTGGATAGCGATGATGACGATTGTGTGAGCTTGTTCTCACCAGTCCGTTCTGCTCTCTTGGAAGTTTCAGGGGCTGAAGAAGTGCACTTAGATCAAGATAGTTTGCTTGATCGAGCTCTGGATGCTTTAGATGAAAAGAGGGGTTCGACAAGGGAGAATGCTTTGTCATTTATCGTTGAAGCATTCAATAACAATATGCAGTATCAGTTTGTGGAGACCAAATTTGTCACCCTATTGCATCACTGCGTTGGTTCAATGAGAAAAGGATCCAAAAAGGCATCTGCAAAGGAGATTGCTCTGGCATCTCATGTCATTGGCTTGCTGATATTGACTGTTGGATATGGTGATAAGGCAAGTGAGATATTTGAAGAATCCATCCATTCTCTTCACGAATCTCTTTCATCTGGATCAGATGTTTCAAAGATATCATTGGTGGAGTGCTTGGCTATTATCACTTTTGTCGGAGGGAATGATCAAGAGGAGACTCAGAGATCAATGGACATGATGTGGCGGATAATTAATCCTAATAAACTTGGTTCAAATGTAGTTACAGTCAAACCCTCTGCTCTGTTGATAACAATTGTGGTGTCTGCTTGGTCCTTTCTCCTCTCCACCATGGATGAAGTGAAGCTAAACTCTAAAACTTGGCGAAATTACATATCTTATTTGTCTAGTCTTCTAGACAAGGAAGACCGATCAATACGTAAAGTTGCTGGGGAAGCACTGGCTCTAATGTTTGAGATTGGAGTTACTGAGAATTTGACTGCTGAACCTAAGAGCGAAAGTGACATGATTGGAGAAGAAAGTGAACCACGGGAAAGTTATGCACATATCCATGGACTGAACGGGAAGGTCATAAATCAAGTTAGAGACCTTTCAATGGAGGCTGGCGGAAAAGGTTCTTCCAAGAAAGATCTTAACAGTCAGAAGATCTTGTTTCGAGATATCTTGGAGTTTTTTGAGCATGGTCACTCTCCTGAAATTTCAATGAAGATTAATGGTGATTTGCTGCAGACATCATCATGGTCCCAAGTGATACAGTTGAACTTTCTCAAGCGTTTCTTGGGCGGAGGGTTTGTTCAGCACATGCAGAAAAATGATCTCCTTCATGATGTCTTCAACTTCATACCCATGAGAAGGAACTTGAGTTACAGAGCACATAAAATGACCAAATGTGAAAAGAGAAAGTTCAAGTCTTCAAACTCAATTCTAAACAAGGCAAGGACACAATCACTTGATAAGCAACGGATGTTATCTGAGGGCAGAAACTTGGGCCATTACGCCGTGAATATGGCTGAAGAAGCCATGTGCTTTTGA 1353 0.4146 MGKRSLRRNAAMLDSDDDDCVSLFSPVRSALLEVSGAEEVHLDQDSLLDRALDALDEKRGSTRENALSFIVEAFNNNMQYQFVETKFVTLLHHCVGSMRKGSKKASAKEIALASHVIGLLILTVGYGDKASEIFEESIHSLHESLSSGSDVSKISLVECLAIITFVGGNDQEETQRSMDMMWRIINPNKLGSNVVTVKPSALLITIVVSAWSFLLSTMDEVKLNSKTWRNYISYLSSLLDKEDRSIRKVAGEALALMFEIGVTENLTAEPKSESDMIGEESEPRESYAHIHGLNGKVINQVRDLSMEAGGKGSSKKDLNSQKILFRDILEFFEHGHSPEISMKINGDLLQTSSWSQVIQLNFLKRFLGGGFVQHMQKNDLLHDVFNFIPMRRNLSYRAHKMTKCEKRKFKSSNSILNKARTQSLDKQRMLSEGRNLGHYAVNMAEEAMCF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0820 450 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 8 442 IPR039777 -
Lele25g0820 450 Pfam Interferon-related developmental regulator (IFRD) 34 333 IPR007701 -
Lele25g0820 450 Pfam Interferon-related protein conserved region 378 431 IPR006921 -
Lele25g0820 450 SUPERFAMILY ARM repeat 45 262 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0820 Lele-ChrLele25 5275167 5278325 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0820 25 5275167 5278325 Lele01g0808 01 4680870 4685091 CCT
Lele25g0820 25 5275167 5278325 Lele02g0780 02 4770311 4774171 CCT
Lele25g0820 25 5275167 5278325 Lele03g0800 03 4680545 4684098 CCT
Lele25g0820 25 5275167 5278325 Lele04g0800 04 4904426 4908271 CCT
Lele25g0820 25 5275167 5278325 Lele27g1258 27 19409059 19411684 hybridization
Lele25g0820 25 5275167 5278325 Lele28g0817 28 5249582 5252056 hybridization