Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0360 ATGCCTACGCCCTCTTCCACCACACGTATCTTTTCGGATCTCATCCTCGATCGCCTGGCCAACACTGATCTCGAAATCAAGCTCAAAGCCATCAGAGAGGTCAAGAACCACATCATCTGGAACCCAACCAAGAAGCTTTCCTACATCAAGCTCGCTGCAGTCCCCGTCATAGCTAATGTCCTCGCCGAAGCCAACGCCGATTCCGTTTGTGGCTCCAACCTCATTGTGCAATCCGCCGCTGCACTCGGTAGCTTTGCCTGTGGCGTCGAGGCTGGCGTCCGTGCTGTTCTCGATGCCGGCGCGTTCCCTCCTTTGATCAGGCTACTCTCTTCCGCCAATGAGAAGGTTGTAGATGCCGCTGCACGTTCTTTACGAATGATCTATCCATCAAAACTAGCTCCAAAGTATGATTTTTACCAGGAGGAAAGCATGAAATTTCTTCTTTCCATTTTGGAAACTGAGAATGAGAATCTATCTGGACTTGGCGCAAGTATTGTCATTCATTCTTGTGACACCATTGCAGAGCAAAATATATTATGGCGTGATGGTGCTTTAGAGAAACTTATTAGCCTTCTTGATAGTTCTCTAAGTCAGAGAGATGCCACTCTAGAGGCTATAGCTGCAATTCTTAAAAATAATTCAGAAGCTGTCTCTAAGTTTGTGGACCTTCAAAATGGAAAAGCTTTAAGTTCTGTAGTAGAATTAGTTAAGTACAGATGTTCTCGGACAAGATTGCTAGCCTGCTTGTGCTTAATTTCTGTTATGAATTCTTCTTCTTGCTATCTGCAAGACATAAGAATTAAAACCAAATTGATACATACTTTGCTAGAGCTTCTTGATGATCATGGTCAAGTTGGAGATGAAGTGTGTTTAGCTTTCTCAAGTTTAATTGCAGGGAAGGAAGATTTACAGAAGCTAGCATTTGAGGCCACTGCCATAGATAAGTTCCACAGTAGCTTGCAATATCATCCGTCACAACCAAGACGTTTTGAAGGGATATTTCTAGCTCTGGCTGATCTTTGTTCAAAGTTGGAATGTTGCAGGTCTAAGTTTCTTTCATTGCAGGTCTTGAATTTTGTAATTGATGCCCTAACTCATGATAATGCAAATGTACGTGCTGCAGCTTGTGTTTGCTTGAGAAGTGTGACTCGCTCAATCAGGGTCTGCAACATAAAACAACAGATGTCATTTGAATTTTTAGGGGGTTAA 1209 0.4301 MPTPSSTTRIFSDLILDRLANTDLEIKLKAIREVKNHIIWNPTKKLSYIKLAAVPVIANVLAEANADSVCGSNLIVQSAAALGSFACGVEAGVRAVLDAGAFPPLIRLLSSANEKVVDAAARSLRMIYPSKLAPKYDFYQEESMKFLLSILETENENLSGLGASIVIHSCDTIAEQNILWRDGALEKLISLLDSSLSQRDATLEAIAAILKNNSEAVSKFVDLQNGKALSSVVELVKYRCSRTRLLACLCLISVMNSSSCYLQDIRIKTKLIHTLLELLDDHGQVGDEVCLAFSSLIAGKEDLQKLAFEATAIDKFHSSLQYHPSQPRRFEGIFLALADLCSKLECCRSKFLSLQVLNFVIDALTHDNANVRAAACVCLRSVTRSIRVCNIKQQMSFEFLGG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0360 402 Gene3D - 13 281 IPR011989 -
Lele27g0360 402 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 8 17 388 IPR038739 -
Lele27g0360 402 Gene3D - 282 395 IPR011989 -
Lele27g0360 402 Pfam Armadillo/beta-catenin-like repeat 93 125 IPR000225 GO:0005515
Lele27g0360 402 FunFam Armadillo repeat-containing protein 8 9 264 - -
Lele27g0360 402 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 100 127 IPR000225 GO:0005515
Lele27g0360 402 SUPERFAMILY ARM repeat 14 383 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0360 Lele-ChrLele27 3152101 3154373 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1278 01 7771655 7775889 Lele27g0360 27 3152101 3154373 CCT
Lele02g1546 02 19495749 19503418 Lele27g0360 27 3152101 3154373 CCT
Lele03g1291 03 7747566 7751808 Lele27g0360 27 3152101 3154373 CCT
Lele04g1536 04 20350618 20357640 Lele27g0360 27 3152101 3154373 CCT
Lele25g1731 25 24974952 24979750 Lele27g0360 27 3152101 3154373 hybridization
Lele26g1738 26 20908513 20913049 Lele27g0360 27 3152101 3154373 hybridization