Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1731 ATGCCTACGCCCTCCTCCACCACACGTATTTCTTCGGATCTCGTCCTCGATCGCCTCGCCAACACTGATCCCGAAATCAAGCTCAAAGCCATCAGAGAGGTCAAGAACCACATCATCGGGAACCCAACCAAGAAGCTTTCCTACATCAAACTCGCTGCAGTCCCTGTCATCGCTAATGTCCTCGTCGAAGCCAACGCCGATTCCGTTTGTGGCTCCAACCTCCTTGTGCAATCCGCCGCGGCACTCGGTAGCTTTGCCTGTGGCGTCGAGGCTGGCGTCCGTGCTGTTCTCGGTGCCGGCGCGTTCCCTCCTTTGATCAGGCTACTCTCTTCCGCCAATGAGAAGGTTGTAGATGCCACTGCACGTTCTTTACGAATGATCTACCAATCAAAACTAGCTCCAAAGTATGATTTTTACAGGGAGGAAAGCATGAAATTTCTTCTTTCCATTTTGGAAACTGATAATGAGAATCTATCTGGACTTGGTGCAAGTATTGTCATTCATTCTTGTGACACCATTGCAGAGCAAAATATATTATGCCGTGATGGTGCTTTAGAGAAACTTCTTAGCCTTCTTGATGGTTCTCTAAGTCAGAGAGATGCCACTCTAGAGGCTCTAGCTGCAATTCTTAAAAATAATTCAGAAGCTATCTCTAAGTTTGTGGACCTTCAAAATGGAAAAGCTTTAAGTTCTGTAGTAGAATTAGTTAAGGACAGATGTTCTCGGACAAGATTGCTAGCTTGCTTGTGCTTGATTTCTGTTAAGAATTCTTCTTCTTGCTATCTGCAAGACATAAGAATTAAAACCAAATTGATACATACTTTGCTTGAGCTTCTTGATGATCACAGTCAAGTTGGAGATGAAGTGTGTTTTGCTTTCTCAAGTTTAATTGCAGGGAAGGAAGATTTACAGAAGCTAGCATTTGAGGCCACTGCCATAGATAAGTTCCACAGTAGCTTGCAATATCATCCTTCACAGCCGAGACGTTTTGAAGGGATATTTCTAGCTCTGGGTGATCTTTGCTCAGAGTTGGAATGCTGCAGGTCTAAGTTTCTTTCATTGCAGGTCTTGAATTTTGTAATTGATGCCCTAACTCATGATAATGCAAATGTACGTGCTGCAGCTTGTGTTTGCTTGAGAAGTGTCACTCGCTCAATCAAGAATTTGAGCGCAGGCCATTTTATGAATGGAAGGATTATCATTCCTTTGGTACGGCTTCTATCTGATATTTCTATCTCTGTTCAGGTTGCAGCCCTTGGTGCTATCAGCAACATAGTGGTTGACTTTACACCTCGTAAGTCAATATTCATGCAGTGTGGAGGCATTAAAGAGCTTGTTCAATTGACCAAGTCAACGGATTTGTCTTTAAGGTTAAATGCTGTATGGGCCTTGAGTAATATGGTATTCCTTGCTGATAGAATGTGTAAGCAAGAAATTTTTATGGAGCTGACAGCATCTTCAGTAGCTAGTCTTATCTGTGATCCTGAGCCTTCTGTTGAAGAAAAAGCCCTTGCCCTTGTTCGTAATTTTGTTGGTGGCAGTATAGATTCTATTGAATATGCTTTTGCTGAAGATGGTATTGTATTAGATGCTGTTGGAAGGCAGCTACGAAAAGCTTCAAACCTTGAGATTGGGATACAGGGGATGTATGTTCTCAGCAATATTGCGAGTGGGAATGAATTTCAAAAGGAAGCTGTGATGCATCAACTCTTTCCACAACCAGAAAACGAATGCCTCTCTTTCTTTAACCTGTATTTGCAGAGTACTGACAGCCACTTACGCACAGCTGTTCTTTGGGTTGTCGTAAATCTCAGCTTTCCATCGAGTCCAGGTGCATTTGATCGCATTATAAAACTGCGCAAGTTTGGCATAATTTCTCAACTGAAGACCATGATCAATGATTCATGCATTGATGTGAAGCTTCGAGCAAAACATGCTCTTGGGCAGATTAGGACTTTTGGTGATAACTAA 1971 0.4267 MPTPSSTTRISSDLVLDRLANTDPEIKLKAIREVKNHIIGNPTKKLSYIKLAAVPVIANVLVEANADSVCGSNLLVQSAAALGSFACGVEAGVRAVLGAGAFPPLIRLLSSANEKVVDATARSLRMIYQSKLAPKYDFYREESMKFLLSILETDNENLSGLGASIVIHSCDTIAEQNILCRDGALEKLLSLLDGSLSQRDATLEALAAILKNNSEAISKFVDLQNGKALSSVVELVKDRCSRTRLLACLCLISVKNSSSCYLQDIRIKTKLIHTLLELLDDHSQVGDEVCFAFSSLIAGKEDLQKLAFEATAIDKFHSSLQYHPSQPRRFEGIFLALGDLCSELECCRSKFLSLQVLNFVIDALTHDNANVRAAACVCLRSVTRSIKNLSAGHFMNGRIIIPLVRLLSDISISVQVAALGAISNIVVDFTPRKSIFMQCGGIKELVQLTKSTDLSLRLNAVWALSNMVFLADRMCKQEIFMELTASSVASLICDPEPSVEEKALALVRNFVGGSIDSIEYAFAEDGIVLDAVGRQLRKASNLEIGIQGMYVLSNIASGNEFQKEAVMHQLFPQPENECLSFFNLYLQSTDSHLRTAVLWVVVNLSFPSSPGAFDRIIKLRKFGIISQLKTMINDSCIDVKLRAKHALGQIRTFGDN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1731 656 Pfam Armadillo/beta-catenin-like repeat 438 468 IPR000225 GO:0005515
Lele25g1731 656 SUPERFAMILY ARM repeat 15 652 IPR016024 -
Lele25g1731 656 FunFam Armadillo repeat-containing protein 8 9 264 - -
Lele25g1731 656 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 8 11 648 IPR038739 -
Lele25g1731 656 Gene3D - 267 652 IPR011989 -
Lele25g1731 656 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 100 127 IPR000225 GO:0005515
Lele25g1731 656 Gene3D - 12 266 IPR011989 -
Lele25g1731 656 SMART arm_5 387 427 IPR000225 GO:0005515
Lele25g1731 656 SMART arm_5 429 469 IPR000225 GO:0005515
Lele25g1731 656 SMART arm_5 171 211 IPR000225 GO:0005515
Lele25g1731 656 SMART arm_5 88 129 IPR000225 GO:0005515
Lele25g1731 656 FunFam Armadillo repeat-containing protein 8 283 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1731 Lele-ChrLele25 24974952 24979750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1278 01 7771655 7775889 Lele25g1731 25 24974952 24979750 CCT
Lele02g1546 02 19495749 19503418 Lele25g1731 25 24974952 24979750 CCT
Lele03g1291 03 7747566 7751808 Lele25g1731 25 24974952 24979750 CCT
Lele04g1536 04 20350618 20357640 Lele25g1731 25 24974952 24979750 CCT
Lele25g1731 25 24974952 24979750 Lele27g0360 27 3152101 3154373 hybridization