Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0847 ATGGGAGGTTGGGCAATCGCGGTGCATGGCGGCGCTGGTGTCGACCCAAATCTCCCACCCCAACGTCAGGAGGAAGCCAAGCAACTCCTTACTCGCTGTCTCCATCTTGGCATCTCTGCTCTTCGTTCCAATCTTCCCGCCATCGATGTCGTTGAACTTGTCGTGAGGGAACTGGAAACAGATCCCCTGTTCAACTCTGGTCGTGGATCTGCTCTGACAGAGAAGGGGACGGTGGAAATGGAGGCGAGCATCATGGACGGTCCAAAAAGAAGATGCGGGGCCGTATCGGGTGTCACCTCCGTCAAGAACCCTATTTCTCTGGCCCGACTCGTAATGGAGAAGTCGCCCCATTCGTACCTCGCCTTCAACGGTGCTGAAGAATTCGCAAGGCAACAGGGTGTGGAGCTGGTGGAAAACGAATACTTCATCACCCCGGAGAATGTGGGCATGCTGAAGCTGGCAAAGGAAGCGAACGCTATTCTGTTTGACTACAGGATTCCAACGAAGGGATACGAGACGTGCGGCGCAGGGGTGGAGAGCCCACTGCAAATGAACGGGATGCCGATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACGGCCAGGGGAGGTGTGCTGCCGCCACGTCTACAGGTGGGCTGATGAACAAGATGATGGGCAGGATAGGCGACTCACCCCTGATCGGCGCAGGGACCTACGCGTGTGACCTGTGTGGGGTATCGTGCACAGGAGAGGGAGAAGCCATCATACGCGGGACGCTGGCGCGTGAGGTGGGGGCGGTGATGGAGTACAAAGGGCTGGGCCTGCAAGAAGCGGTGGACTTTGTGATAAGGGAGCGGCTTGACGAGGGCAAGGCGGGGCTGATAGCGGTGTCGAAGAGCGGAGAAGTGGCTTATGGGTTTAACTGTAACGGCATGTTCAGGGGCTGCGCCACTGAAGATGGCTTCATGGAGGTTGGAATCTGGGAATGA 981 0.58 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLHLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGVTSVKNPISLARLVMEKSPHSYLAFNGAEEFARQQGVELVENEYFITPENVGMLKLAKEANAILFDYRIPTKGYETCGAGVESPLQMNGMPISVYAPETVGCVVVDGQGRCAAATSTGGLMNKMMGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVGAVMEYKGLGLQEAVDFVIRERLDEGKAGLIAVSKSGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0847 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Lele25g0847 326 CDD Asparaginase_2 5 318 - -
Lele25g0847 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Lele25g0847 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Lele25g0847 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Lele25g0847 326 Gene3D (Glycosyl)asparaginase 196 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0847 Lele-ChrLele25 5446023 5447692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0847 6 286 Miscellaneous Gene Families AT4G00590 27.723 5.15e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0847 25 5446023 5447692 Lele01g0832 01 4806160 4807645 CCT
Lele25g0847 25 5446023 5447692 Lele02g0809 02 4926188 4927691 CCT
Lele25g0847 25 5446023 5447692 Lele03g0824 03 4816681 4819333 CCT
Lele25g0847 25 5446023 5447692 Lele04g0829 04 5084937 5086441 CCT
Lele25g0847 25 5446023 5447692 Lele27g1228 27 19235307 19236987 hybridization
Lele25g0847 25 5446023 5447692 Lele28g0846 28 5433576 5435249 hybridization