Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0829 ATGGGGGCCTGGGCTATAGCCGTGCACGGTGGCGCTGGCGTCGACCCTAATCTCCCAGCCCACCGTCAAGAACAAGCCAAACAACTTCTCACTCGCTGTCTTCAACTCGGCATCTCTGCTCTCAATTCCAATCTACCCGCCATCGATGTCGTCGAACTCGTCGTGAGAGAATTGGAAACAGATCCGATCTTCAACTCGGGACGTGGATCTGCGCTGACAGAAAAAGGAACAGTGGAAATGGAGGCGAGCATCATGGACGGAACAAAAAGAAGATGCGGTGCCGTATCTGGCGTTACCACCGTGAAGAACCCGATATCGCTGGCCCGATTGGTCATGGACAAATCCCCCCATTCCTACCTCGCTTTCTCCGGTGCTGAACAATTCGCCAGGCAGCAGGGTGTGGAAACAGTGGACAATGAGTATTTCATTACTGCTGAGAATGTTGGCATGCTGAAGCTGGCAAAGGAAGCGAATGCCATTCTGTTTGATTACAGGATCCCAGCCGTAAAAGAAACGTGCGGTGCGGGGATAGAGAGCCCACTGCAAATGAATGGACTGCCCATCAGCGTATACGCGCCGGAGACGGTGGGGTGCGTGGTAGTGGATAGCGAGGGACGGTGTGCGGCAGGGACGTCAACGGGAGGGCTGATGAACAAAATGACGGGAAGGATAGGAGACTCGCCGTTGATCGGTGCCGGGACCTACGCGTGCGACGCGTGCGGCGTGTCGTGCACGGGGGAGGGAGAGGCCATCATAAGAGGGACACTGGCGCGTGAGGTGGCGGCGGTTATGGAGTACAGAGGACTAAAACTTCAGGAAGCCGTTGACTTCGTAATAAAGGAAAGGCTGGACGAAGGGTATGCGGGTTTGATTGCAGTGTCGAAGACCGGTGAAGTTGCCTACGGCTTCAATTGTAATGGCATGTTCAGGGGCTGCGCCACTCAGGATGGCTTCATGGAAGTTGGAATCTGGGAATAG 978 0.5511 MGAWAIAVHGGAGVDPNLPAHRQEQAKQLLTRCLQLGISALNSNLPAIDVVELVVRELETDPIFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEQFARQQGVETVDNEYFITAENVGMLKLAKEANAILFDYRIPAVKETCGAGIESPLQMNGLPISVYAPETVGCVVVDSEGRCAAGTSTGGLMNKMTGRIGDSPLIGAGTYACDACGVSCTGEGEAIIRGTLAREVAAVMEYRGLKLQEAVDFVIKERLDEGYAGLIAVSKTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0829 325 FunFam Isoaspartyl peptidase/L-asparaginase 195 325 - -
Lele04g0829 325 CDD Asparaginase_2 5 317 - -
Lele04g0829 325 Gene3D (Glycosyl)asparaginase 195 325 - -
Lele04g0829 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Lele04g0829 325 Pfam Asparaginase 4 324 IPR000246 GO:0016787
Lele04g0829 325 PANTHER L-ASPARAGINASE 4 311 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0829 Lele-ChrLele04 5084937 5086441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0829 6 259 Miscellaneous Gene Families AT4G00590 29.242 5.38e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0847 25 5446023 5447692 Lele04g0829 04 5084937 5086441 CCT
Lele26g0865 26 5527261 5531935 Lele04g0829 04 5084937 5086441 CCT
Lele27g1228 27 19235307 19236987 Lele04g0829 04 5084937 5086441 CCT
Lele04g0829 04 5084937 5086441 Lele04g0829 04 5084937 5086441 ECH
Lele01g0832 01 4806160 4807645 Lele04g0829 04 5084937 5086441 hybridization
Lele02g0809 02 4926188 4927691 Lele04g0829 04 5084937 5086441 hybridization