Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0824 ATGTCTGCTTTCAGAGCAGCGAGCGGTGTTTCTTTCCGAGGGCGAATCTCTCATCGCCATAACCACACCCAAAAACGCTCGACACCTACGACGGCAGAGGGGGATCATATGGGGGCCTGGGCTATAGCCGTGCACGGTGGCGCTGGCGTCGACCCTAATCTCCCAGCCCACCGTCAAGAACAAGCCAAACAACTTCTTACTCGCTGTCTCCAACTCGGCATCTCTGCTCTTAATTCCAATCTACCCGCCATCGATGTCGTCGAACTTGTCGTAAGAGAACTGGAAACAGATCCGCTGTTCAACTCGGGACGTGGATCTGCGCTGACAGAAAAAGGAACAGTGGAAATGGAGGCGAGCATCATGGACGGACCAAAGAGAAGATGCGGCGCCGTATCAGGCGTTACCACCGTCAAGAACCCGATATCGCTGGCCCGACTGGTCATGGACAGATCCCCTCATTCCTACATCGCTTTCTCCGGCGCTGAACAATTCGCCAGGCAGCAGGGTGTGGAAACGGTGGACAACGAGTATTTCATCACTCCTGAGAATGTTGGCATGCTGAAGCTGGCAAAGGAAGCGAATGCCATTCTGTTTGATTACAGGATCCCAGCTGTAAAGGAAGCGTGCGGTGCAGGGATAGCGAGCCCACTGCAAATGAATGGACTGCCCATCAGCGTATACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGCGAGGGACGGTGTGCGGCAGGGACGTCAACGGGAGGGTTGATGAACAAAATGGCCGGTAGGATCGGAGACTCGCCGTTGATCGGTGCCGGGACCTACGCGTGTGAGGTGTGCGGCGTGTCGTGCACGGGGGAGGGAGAGGCCATCATAAGAGGGACACTGGCGCGTGAGGTGGCGGCGGTTATGGAGTACAGAGGAATGAAACTGCAGGAAGCGGTTGACTTCGTGATAAAGGAAAGGCTGGACGAAGGGTATGCGGGTTTGATTGCAGTGTCGAAGACTGGTGAAGTAGCCTACGGCTTCAATTGTAATGGCATGTTCAGGGGCTGCGCCACTCAGGATGGCTTCATGGAAGTTGGAATCTGGGAATAG 1086 0.5589 MSAFRAASGVSFRGRISHRHNHTQKRSTPTTAEGDHMGAWAIAVHGGAGVDPNLPAHRQEQAKQLLTRCLQLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGVTTVKNPISLARLVMDRSPHSYIAFSGAEQFARQQGVETVDNEYFITPENVGMLKLAKEANAILFDYRIPAVKEACGAGIASPLQMNGLPISVYAPETVGCVVVDSEGRCAAGTSTGGLMNKMAGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYRGMKLQEAVDFVIKERLDEGYAGLIAVSKTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0824 361 CDD Asparaginase_2 41 353 - -
Lele03g0824 361 Gene3D (Glycosyl)asparaginase 231 361 - -
Lele03g0824 361 FunFam Isoaspartyl peptidase/L-asparaginase 231 361 - -
Lele03g0824 361 MobiDBLite consensus disorder prediction 1 34 - -
Lele03g0824 361 PANTHER L-ASPARAGINASE 40 347 IPR000246 GO:0016787
Lele03g0824 361 Pfam Asparaginase 40 360 IPR000246 GO:0016787
Lele03g0824 361 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 40 358 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0824 Lele-ChrLele03 4816681 4819333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0824 42 295 Miscellaneous Gene Families AT4G00590 28.520 2.03e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0847 25 5446023 5447692 Lele03g0824 03 4816681 4819333 CCT
Lele26g0865 26 5527261 5531935 Lele03g0824 03 4816681 4819333 CCT
Lele27g1228 27 19235307 19236987 Lele03g0824 03 4816681 4819333 CCT
Lele03g0824 03 4816681 4819333 Lele03g0824 03 4816681 4819333 ECH
Lele01g0832 01 4806160 4807645 Lele03g0824 03 4816681 4819333 hybridization
Lele02g0809 02 4926188 4927691 Lele03g0824 03 4816681 4819333 hybridization