Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1228 ATGGGAGGTTGGGCAATCGCGGTGCATGGCGGCGCTGGTGTCGACCCAAATCTCCCACCCCAGCGTCAGGAGGAAGCCAAGCAACTCCTTACTCGCTGTCTCCATCTTGGCATCTCTGCTCTTCGTTCCAATCTTCCCGCCATCGATGTCGTTGAACTTGTCGTGAGGGAACTGGAAACAGATCCCCTGTTCAACTCTGGTTGTGGATCTGCTCTGACAGAGAAGGGGACGGTGGAAATGGAGGCGAGCATCATGGACGGCCCAAAAAGAAGATGCGGCGCCGTATCGGGTGTCACCTCCGTGAAGAACCCTATTTCTCTCGCCCGACTCGTAATGGAGAAGTCGCCCCATTCGTACCTCGCCTTCAACGGTGCTGAAGAATTCGCAAGGCAGCAGGGTGTGGAGCTGGTGGAAAACGAATACTTCATCACCCCTGAGAATGTGGGCATGCTGAAGCTGGCAAAGGAAGCGAACGCTATTCTGTTTGACTATAGGATTCCAACGACGGGATACGAGACGTGCGGCGCAGGGGTGGAGAGCCCGCTACAAATGAACGGGATGCCGATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACGGCCAGGGAAGGTGTGCTGCTGCCACGTCGACAGGTGGGCTGATGAACAAGATGATGGGCAGGATAGGCGACTCACCCCTGATCGGCGCAGGGACCTACGCGTGTGACTTGTGTGGGGTATCGTGCACAGGGGAGGGAGAAGCCATCATACGCGGGACGCTGGCGCGTGAGGTGGGGGCGGTGATGGAGTACAAAGGGCTGGGCCTGCAAGAAGCGGTGGACTTTGTCATAAAGGAGCGGCTTGACGAGGGCAAGGCGGGGCTGATAGCGGTGTCGAAGAGCGGAGAAGTGGCTTATGGGTTTAACTGTAACGGCATGTTCAGGGGCTGCGCCACTGAAGATGGCTTCATGGAGGTTGGAATCTGGGAATGA 981 0.579 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLHLGISALRSNLPAIDVVELVVRELETDPLFNSGCGSALTEKGTVEMEASIMDGPKRRCGAVSGVTSVKNPISLARLVMEKSPHSYLAFNGAEEFARQQGVELVENEYFITPENVGMLKLAKEANAILFDYRIPTTGYETCGAGVESPLQMNGMPISVYAPETVGCVVVDGQGRCAAATSTGGLMNKMMGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVGAVMEYKGLGLQEAVDFVIKERLDEGKAGLIAVSKSGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1228 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Lele27g1228 326 CDD Asparaginase_2 5 318 - -
Lele27g1228 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Lele27g1228 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Lele27g1228 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Lele27g1228 326 Gene3D (Glycosyl)asparaginase 196 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1228 Lele-ChrLele27 19235307 19236987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1228 6 260 Miscellaneous Gene Families AT4G00590 28.520 4.55e-17 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1228 27 19235307 19236987 Lele01g0832 01 4806160 4807645 CCT
Lele27g1228 27 19235307 19236987 Lele02g0809 02 4926188 4927691 CCT
Lele27g1228 27 19235307 19236987 Lele03g0824 03 4816681 4819333 CCT
Lele27g1228 27 19235307 19236987 Lele04g0829 04 5084937 5086441 CCT
Lele25g0847 25 5446023 5447692 Lele27g1228 27 19235307 19236987 hybridization
Lele26g0865 26 5527261 5531935 Lele27g1228 27 19235307 19236987 hybridization