Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0846 ATGGGAGGTTGGGCAATCGCGGTGCATGGCGGCGCTGGTGTCGACCCTAATCTCCCACCCCAGCGTCAGGAGCAAGCAAAGCAACTCCTTACTCGCTGTCTCCATCTTGGCATCTCTGCTCTTCGCTCCAACCTTCCCGCCATCGATGTCGTCGAACTTGTCGTGAGGGAACTGGAAACGGATCCCCTGTTCAACTCTGGTCGTGGATCTGCTCTGACAGAGAAAGGGACGGTGGAAATGGAGGCGAGCATCATGGACGGCCCAAAAAGAAGATGCGGAGCCGTATCGGGTGTCACCTCGGTGAAGAACCCTATTTCGCTGGCCCGACTCGTAATGGAGAAGTCCCCCCATTCGTACCTCGCCTTCAACGGTGCTGAAGAATTCGCAAGGCAACAGGGTGTGGAGCTGGTGGAAAACGAATACTTCATCACCCCTGAGAATGTGGGCATGCTGAAGCTGGCGAAGGAAGCGAACGCTATTTTGTTTGACTACAGGATTCCAACGATGGGATACGAGACTTGCGGCGCAGGGGTCGAGAGCCCACTGCAAATGAACGGGATGCCGATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACGGGCAGGGAAGGTGTGCGGCCGCCACGTCGACAGGGGGGCTGATGAACAAGATGATCGGCAGGATAGGTGACTCGCCCCTGATCGGCGCAGGTACCTACGCGTGTGACCTGTGTGGGGTATCGTGCACAGGAGAGGGAGAAGCGATCATACGCGGGACGCTGGCGCGTGAGGTGGGGGCGGTGATGGAGTACAAAGGGCTGGGCTTGCAAGAAGCGGTGGACTTCGTGATAAAGGAGCGGCTCGACGAAGGCAAGGCGGGGCTGATAGCGGTGTCGAAGGGCGGAGAAGTGGCTTATGGGTTTAACTGTAACGGCATGTTCAGGGGATGTGCCACTGAGGATGGCTTCATGGAGGTTGGAATCTGGGAATGA 981 0.5821 MGGWAIAVHGGAGVDPNLPPQRQEQAKQLLTRCLHLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGVTSVKNPISLARLVMEKSPHSYLAFNGAEEFARQQGVELVENEYFITPENVGMLKLAKEANAILFDYRIPTMGYETCGAGVESPLQMNGMPISVYAPETVGCVVVDGQGRCAAATSTGGLMNKMIGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVGAVMEYKGLGLQEAVDFVIKERLDEGKAGLIAVSKGGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0846 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Lele28g0846 326 CDD Asparaginase_2 5 318 - -
Lele28g0846 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Lele28g0846 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Lele28g0846 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Lele28g0846 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0846 Lele-ChrLele28 5433576 5435249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0846 6 260 Miscellaneous Gene Families AT4G00590 28.881 3.36e-18 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0846 28 5433576 5435249 Lele02g0807 02 4919443 4920539 CCT
Lele28g0846 28 5433576 5435249 Lele03g0822 03 4809892 4811732 CCT
Lele28g0846 28 5433576 5435249 Lele04g0828 04 5080859 5081952 CCT
Lele25g0847 25 5446023 5447692 Lele28g0846 28 5433576 5435249 hybridization
Lele26g0865 26 5527261 5531935 Lele28g0846 28 5433576 5435249 hybridization