Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0755 ATGGAGGAAGGTTTCCTGAGAAGCAAGTTCAAGAGGGTCTGTGTCTTTTGTGGTAGCAACTCCGGCAATAGGGAAGTCTTTAGCAACGCTACGATTGAATTGGGCAATGAGCTGGTGAAGAGGAAGATAAACTTGGTTTATGGTGGAGGAAGCATTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGAGGGAGGCTGCCGTGTCGTTGGGATAATTCCAAAAGCTCTTATGCCTATTGAGATATCTGGTGAAACAGTAGGAGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCGGGAGGCTGATGCATTTATTGCTCTCCCTGGTAGTTACCACTTGCCAGAAAAGCTCTCATCAACAATTTAG 384 0.4531 MEEGFLRSKFKRVCVFCGSNSGNREVFSNATIELGNELVKRKINLVYGGGSIGLMGLISQRVYEGGCRVVGIIPKALMPIEISGETVGEVRIVSDMHERKAAMAREADAFIALPGSYHLPEKLSSTI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0755 127 TIGRFAM TIGR00730: TIGR00730 family protein 11 117 IPR005269 GO:0009691|GO:0016787
Lele25g0755 127 Gene3D - 5 124 - -
Lele25g0755 127 SUPERFAMILY MCP/YpsA-like 8 117 - -
Lele25g0755 127 Pfam Possible lysine decarboxylase 55 115 IPR031100 -
Lele25g0755 127 PANTHER LOG FAMILY PROTEIN YJL055W 7 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0755 Lele-ChrLele25 4798397 4799520 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0755 25 4798397 4799520 Lele01g0749 01 4373238 4374882 CCT
Lele25g0755 25 4798397 4799520 Lele02g0729 02 4403937 4405656 CCT
Lele25g0755 25 4798397 4799520 Lele03g0745 03 4380282 4383659 CCT
Lele25g0755 25 4798397 4799520 Lele04g0749 04 4561075 4562830 CCT
Lele25g0755 25 4798397 4799520 Lele27g1320 27 19886566 19888774 hybridization
Lele25g0755 25 4798397 4799520 Lele28g0751 28 4783579 4785816 hybridization