Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0729 ATGGAGGACGGCTTCCATAGAAGCAAGTTCAAGAAGGTCTGTGTCTACTGCGGCAGCAACTCCGGCAACAGACAAGTCTTCACCGATGCTGCGATTGGTTTGGGTCATGAACTGTCAAAGAATGCTGAACAGGCTCACATAAATGCTTCTATTGCTCTAGATAGGAATTCTGATACACTGGACAGAACTGGGGGTGTTCTTCGGGTTAAGAGAAAGATAGATTTGGTTTATGGTGGGGCTAATGTTGGACTGATGGGCATAATTTCTAAGAGTGTGTATGATGGAGGCTGCCGTGTCCTTGGGATCATTCCAAAAGCTCTCATACCTGTTGAGATATCTGGAGAATCAGTCGGTGAAGTGAGAATAGTCTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCGTGAGGCTGAAGCATTTATTGCTCTCCCCGGAGGATATGGAACCATGGAAGAGCTGTTGGAGATAATAACTTGGGCCCAACTTGGAATTCATAAAAAGCCGGTTGGTCTACTGAATGTTGATGGTTACTATAATTGTTTGCTTGCATTATTTGACAATGGTGTTCGAGAAGGCTTTATTAGGCCTTGTGCTCGGAATATAGTTGTTTCAGCTTCAACGGCGGAAGAACTTGTGATGAAGATGGAGCATTACACTCCTTCGCATGAACAGGTCGCTCCTTACGAGAGCTGGCAAAATAATGCCAAGGACAAGAAAATGGAGAAAGAGACTTTTATTGCTCGCATGCCCTTCTCCTGA 759 0.4493 MEDGFHRSKFKKVCVYCGSNSGNRQVFTDAAIGLGHELSKNAEQAHINASIALDRNSDTLDRTGGVLRVKRKIDLVYGGANVGLMGIISKSVYDGGCRVLGIIPKALIPVEISGESVGEVRIVSDMHERKAAMAREAEAFIALPGGYGTMEELLEIITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVREGFIRPCARNIVVSASTAEELVMKMEHYTPSHEQVAPYESWQNNAKDKKMEKETFIARMPFS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0729 252 PANTHER LOG FAMILY PROTEIN YJL055W 7 234 - -
Lele02g0729 252 SUPERFAMILY MCP/YpsA-like 9 218 - -
Lele02g0729 252 Pfam Possible lysine decarboxylase 85 215 IPR031100 -
Lele02g0729 252 TIGRFAM TIGR00730: TIGR00730 family protein 59 218 IPR005269 GO:0009691|GO:0016787
Lele02g0729 252 Gene3D - 9 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0729 Lele-ChrLele02 4403937 4405656 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0752 28 4787258 4787923 Lele02g0729 02 4403937 4405656 CCT
Lele25g0755 25 4798397 4799520 Lele02g0729 02 4403937 4405656 CCT
Lele26g0763 26 4860717 4862950 Lele02g0729 02 4403937 4405656 CCT
Lele27g1320 27 19886566 19888774 Lele02g0729 02 4403937 4405656 CCT
Lele02g0729 02 4403937 4405656 Lele03g0745 03 4380282 4383659 hybridization
Lele02g0729 02 4403937 4405656 Lele04g0749 04 4561075 4562830 hybridization