Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0751 ATGGCGGAAGGTTTCCTGAGAAGCAAGTTCAAGAGGGTCTGTGTCTTCTGCGGTAGCAACTCCGGCAATAGGGAAGTCTTTAGCGACGCTACGATTGAATTGGGCAATGAACTGGTGAAGAGGAAGATAGACTTGGTTTATGGTGGAGGAAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCGTGTTCTTGGGATAATTCCAAAAGCTCTTATGCCTATTGAGATATCTGGTGAAACAGTAGGAGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCGAGAGGCTGATGCATTTATTGCTCTCCCTGGAGGGTATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCTCAACTGGGGATCCATAAAAAGCCGGTTGGTCTACTGAATGTTGATGGTTACTATAACTGTTTGCTTGCCTTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCCTGGTGCTCGAAATATAATTATCTCTGCTCCAACGGCCAAGGAACTTATGACGAAGATGGAGCATTACGCTCCGTCACATGAACATGTTGCCCCGCATGAGAACTGGCAGATGGAGCAACTAGGTAATTATCCGAGACAAGAAAATGAAGAATGA 651 0.4531 MAEGFLRSKFKRVCVFCGSNSGNREVFSDATIELGNELVKRKIDLVYGGGSVGLMGLISQRVYDGGCRVLGIIPKALMPIEISGETVGEVRIVSDMHERKAAMAREADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVEEGFIKPGARNIIISAPTAKELMTKMEHYAPSHEHVAPHENWQMEQLGNYPRQENEE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0751 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Lele28g0751 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Lele28g0751 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Lele28g0751 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 211 - -
Lele28g0751 216 Gene3D - 9 204 - -
Lele28g0751 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0751 Lele-ChrLele28 4783579 4785816 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0755 25 4798397 4799520 Lele28g0751 28 4783579 4785816 hybridization
Lele26g0763 26 4860717 4862950 Lele28g0751 28 4783579 4785816 hybridization