Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0745 ATGGAGGACGGCTTCCATAGGAGCAAGTTCAAGAAGGTCTGTGTCTACTGCGGCAGCAACTCCGGCAACAGACAAGTCTTCAGCGATGCTACGATTGATTTGGGCCATGAACTTGTCAGTTATTTTGCATCATACTCGTTTATTTTATTATGGTCGCCGGGCACGTACTGTCTATGTTACAGATATATGAATTCTGATACTCTGGGCAGAACTTGGGGAGTTCTTCGGGTTAAGAGAAAGATAGATTTGGTTTATGGTGGGGCTAATGTTGGACTGATGGGCATAATTTCTCAGAGAGTGCATGATGGAGGCTGCCGCGTTCTTGGGATCATTCCAAAAGCTCTCATACCTGTTGAGATATCTGGAGAATCAGTCGGTGCAGTGAGAATAGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCGTGAGGCTGAAGCATTTATTGCTCTCCCCGGAGGATATGGAACCATTGAAGAGCTGTTGGAGATAATAACTTGGGCCCAACTTGGAATTCATAAAAAGCCGGTTGGTCTACTGAATGTTGATGGTTACTATAATTGTCTGCTTGCATTATTTGACAATGGTGTTCAAGAAGGCTTCATTAGGCCTTGTGCTCGGAATATAGTTGTTTCAGCTTCAACGGCCAAAGAACTTTTGATGAAGATGGAGAGCCTGAGTAGATGGGGTCCTTTTATGTTTGTCCGCAACTGTATACCATATGGTTGCTCTCTATTAAGGCTTGATATTGGTGTTCGGGAGGTTTCCTACATTAGACATCCTCAGGAAACAGTGAAAAGATGGTGCAAACTAGTACTTGTTGGCATATATGTGGTTTGTGGGGAGCCACAACAGCCCAGAGAGAATCTCCATTACTGTTGGTTGGCCATGTTAGGAGGAATAGGCTGCCTTCATGTCTCTTCCCTTAGAGGATATGGCCCCTTACGATTTCGCCGGGGAGACGACACGAGTCTCAGGTTTCATGACGCTTCTCTGGGATTTTTCAATAAAGTATTTGTCTTTCTTGCATCATGGAATCTTCCACTACTGGTACCATAA 1059 0.4448 MEDGFHRSKFKKVCVYCGSNSGNRQVFSDATIDLGHELVSYFASYSFILLWSPGTYCLCYRYMNSDTLGRTWGVLRVKRKIDLVYGGANVGLMGIISQRVHDGGCRVLGIIPKALIPVEISGESVGAVRIVSDMHERKAAMAREAEAFIALPGGYGTIEELLEIITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVQEGFIRPCARNIVVSASTAKELLMKMESLSRWGPFMFVRNCIPYGCSLLRLDIGVREVSYIRHPQETVKRWCKLVLVGIYVVCGEPQQPRENLHYCWLAMLGGIGCLHVSSLRGYGPLRFRRGDDTSLRFHDASLGFFNKVFVFLASWNLPLLVP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0745 352 PANTHER LOG FAMILY PROTEIN YJL055W 7 226 - -
Lele03g0745 352 TIGRFAM TIGR00730: TIGR00730 family protein 70 224 IPR005269 GO:0009691|GO:0016787
Lele03g0745 352 Gene3D - 9 230 - -
Lele03g0745 352 SUPERFAMILY MCP/YpsA-like 8 223 - -
Lele03g0745 352 Pfam Possible lysine decarboxylase 93 223 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0745 Lele-ChrLele03 4380282 4383659 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0752 28 4787258 4787923 Lele03g0745 03 4380282 4383659 CCT
Lele25g0755 25 4798397 4799520 Lele03g0745 03 4380282 4383659 CCT
Lele26g0763 26 4860717 4862950 Lele03g0745 03 4380282 4383659 CCT
Lele27g1320 27 19886566 19888774 Lele03g0745 03 4380282 4383659 CCT
Lele01g0749 01 4373238 4374882 Lele03g0745 03 4380282 4383659 hybridization
Lele02g0729 02 4403937 4405656 Lele03g0745 03 4380282 4383659 hybridization