Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0749 ATGGAGGACGGTTTCCATAGAAGCAAGTTCAAGAAGGTCTGTGTCTACTGCGGCAGCAACTCCGGCAACAGACAAGTCTTCAGCGATGCTGCGATTAATTTGGGTCATGAACTGGTTAAGAGAAAGATAGATTTGGTTTATGGTGGGGCTAATGTTGGACTGATGGGCATAATTTCTCAGAGTGTGTATGATGGAGGCTGCCGTGTCCTTGGGATCATTCCAAAAGCTCTCATACCTATTGAGATATCTGGAGAATCAGTCGGTGAAGTGAGAATAGTCTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCGTGAGGCTGAAGCATTTATTGCTCTCCCCGGAGGATATGGAACCATGGAAGAGCTGTTGGAGATAATAACTTGGGCCCAACTTGGAATTCATAAAAAGCCGGTTGGTCTACTGAATGTTGATGGTTACTATAATTGTTTGCTTGCATTATTTGACAATGGTGTTCAAGAAGGCTTTATTAGGCCTTGTGCTCGGAATATAGTTGTTTCAGCTTCAACGGCGGAGGAACTTGTGATGAAGATGGAGCATTACACTCCTTCGCATGAACTGGTCGCTCCTTACGAGAGCTGGCAAAATAATGCCAAGGACAAGAAAATGGAGAAAGAGACTTTTATTGCTCGCATGCCCTTCTCCTTAACTGACTCCTGA 681 0.4464 MEDGFHRSKFKKVCVYCGSNSGNRQVFSDAAINLGHELVKRKIDLVYGGANVGLMGIISQSVYDGGCRVLGIIPKALIPIEISGESVGEVRIVSDMHERKAAMAREAEAFIALPGGYGTMEELLEIITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVQEGFIRPCARNIVVSASTAEELVMKMEHYTPSHELVAPYESWQNNAKDKKMEKETFIARMPFSLTDS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0749 226 PANTHER LOG FAMILY PROTEIN YJL055W 7 204 - -
Lele04g0749 226 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Lele04g0749 226 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Lele04g0749 226 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Lele04g0749 226 Gene3D - 9 204 - -
Lele04g0749 226 SUPERFAMILY MCP/YpsA-like 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0749 Lele-ChrLele04 4561075 4562830 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0752 28 4787258 4787923 Lele04g0749 04 4561075 4562830 CCT
Lele25g0755 25 4798397 4799520 Lele04g0749 04 4561075 4562830 CCT
Lele26g0763 26 4860717 4862950 Lele04g0749 04 4561075 4562830 CCT
Lele27g1320 27 19886566 19888774 Lele04g0749 04 4561075 4562830 CCT
Lele01g0749 01 4373238 4374882 Lele04g0749 04 4561075 4562830 hybridization
Lele02g0729 02 4403937 4405656 Lele04g0749 04 4561075 4562830 hybridization