Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0333 ATGAAGATTAGAAAGATCAGGACCTCCTTAGATCAGAGGACACGTGCCCTTCCCAAAACCGGCAGATGTCAGTGTCCTTCTGGTAGTCATTTGTTTTTTCGTCGGTTGACTATATTTGCGCGTTCACACCAACTGCTCTTGAAGGAATCGCGGGAGGCTTTGGCTGAAAAGCAGAGGAGATGGAACCTGCTGCGAAACCGTGACGTCGTGGTTACGCATGAAACGCGGAAGAAGATAGTAGAGAGTAGAGTCCCTTTCAGATCGAGCTTCAATTCAACATTCAAAGATATGCCAATCTCACCTCGCTTCTTCCGTTTCCACTTTCCACTTTCCATCACTCCCCCACCCTCTTCCCGCTTAAACGAAGAAAGGAGAAAAGCCTTGGCATTGGCTGATTTTGGATGTGGTCCTCATTGTGGTTCTACACTGGGTCTTCTGTTGAGTTTTGCAAGTTACCGGGTTACATATCACAAGGGAACGTATGGGAATGGAATGCCATATCGTGCAATACAGGTTGATCAGGGTCGACCCTGATACCGTCACATTTCACTCGGCCTAACGGGAGGTGCCCTCGTTTCCCCAGACGACGAAACCCAAAAGGGGAAGCGGCTTACAGATGCTGATGATGCTTTGAATAAAAGAGTTGCTTTGCTCTTCCTCTTCTGTGTTCTTCCTTCCATGGTTGCCGCCATCCGCCTTCACAAGAACCCATTCTGCGTCCAGGGTCGTGTCTACTGTGACGCTTGCCGTGCTGGTTTTGAGACCTCTGCCACCACCTACATTCCCGGTGCTGAGGTTCTTGTGGAATGCAAGAATAGGAACACCGCCGAAGTTATGTTCTCTAAGAAGGGCGTGACTGACTCCACGGGAACTTACAAAATCTTTGTGAATGAGGATCATGAGGACCATATTTGCAACGCCAAGCTTGTTAGCAGTCCTCAGAGTAATTGCCAAGAAGCCGCCCCTGGACGCGATGAAGCCCGTGTTGTTCTTACCCGCAACAATGGGATCGTATCTGACGACAGATACGCCAATTCTTTGGGCTACATGAAGACCGAGGCCGATTCCGGTTGTTCTGAGATTCTCAGGCAATACCAGATGTTTGATGAAGAAAATTAA 1119 0.4879 MKIRKIRTSLDQRTRALPKTGRCQCPSGSHLFFRRLTIFARSHQLLLKESREALAEKQRRWNLLRNRDVVVTHETRKKIVESRVPFRSSFNSTFKDMPISPRFFRFHFPLSITPPPSSRLNEERRKALALADFGCGPHCGSTLGLLLSFASYRVTYHKGTYGNGMPYRAIQVDQGRPXYRHISLGLTGGALVSPDDETQKGKRLTDADDALNKRVALLFLFCVLPSMVAAIRLHKNPFCVQGRVYCDACRAGFETSATTYIPGAEVLVECKNRNTAEVMFSKKGVTDSTGTYKIFVNEDHEDHICNAKLVSSPQSNCQEAAPGRDEARVVLTRNNGIVSDDRYANSLGYMKTEADSGCSEILRQYQMFDEEN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0333 372 Coils Coil 47 67 - -
Lele25g0333 372 Pfam Pollen protein Ole e 1 like 240 320 - -
Lele25g0333 372 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 217 370 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0333 Lele-ChrLele25 2015570 2028159 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0333 25 2015570 2028159 Lele01g0379 01 2221318 2224135 CCT
Lele25g0333 25 2015570 2028159 Lele02g0376 02 2192636 2195412 CCT
Lele25g0333 25 2015570 2028159 Lele03g0388 03 2245518 2246762 CCT
Lele25g0333 25 2015570 2028159 Lele04g0383 04 2292120 2294888 CCT
Lele25g0333 25 2015570 2028159 Lele27g1753 27 22732426 22733517 hybridization
Lele25g0333 25 2015570 2028159 Lele28g0348 28 2116715 2117822 hybridization