Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele04g0383 | ATGGTAGGGAAGGCCAAGAACAAGATGGAGAATGAAGTGGGTTGTGGTTTCATCGGGAAGATTTTCCATCTCGCAGGCTTTAAGCTGAGGAAATCATCTGTTCATTCACTACCCATGAAGGCTAGCAACAATGTCCAGAACGAGCAGAACAAAACCGAGTCCGAGAAGCCGCCAAATCCTGAATCCAGGGATACTTCAACTGAGTCACACAAACCGGCCAGAAAGAGCCCTTCCGATCATCGAACACCTCCTACCATCCGAAAGAATCAAAATCCGAGACCTTCGGATGCGGCAAGAAGCTCAACATCCTCTCGCAATTCATCCCAAACTACGATTCAACAAAAGCCCAAGTTGAGTCATGATAGCAGAACACAGAGACAGCCTACTGAGAACTCTTTGGAGCTTGCTAGAGTAAGCACTCATTACCAGCGAGAGAACGAGAATAAATCCCCACTCAAACTTACTGGTAATTTGCTTGCAAATAACAGCCCAAGAACTAGAACTAGGAGTCGCGAAAGTGTTCCCAAGAATAAAGACGTTATGAACTCAGCGCGCAAGTCTCACACTCACGCAAGTATAGGTGTAACGGGGAATATTATGAGGAAGAGCACTGATGAGCTTGCGCAGTTATGGAGTCCCAAGAACAGAGTAGACCCTGAAGTGTTGAAGACAATGGGAAACGAAGCGTATAAGCAAGGAAGATTTGAAGAGGCTTTGTCTCTGTACGAGCGAGCGATTGCCGTTGATTCAAATAAAGCGACGTTTCATTGCAATAAGAGTGCAGCTTTGATAGGATTAGGCCGTCTTCTGGAAGCAATTGTTGAGTGCCAGGAAGCTATCCGGTTGGAACCTTCGTATAACAGACCCCATCACCGTTTGGCAACCATATATCTCAGATTGGGAGAAGCAGAAAAGGCACTAAGTTACAATGTCGCAACCCCATATTCTGATTCTGCACTTGCCTTCCAAGCTCAGTCTCTTCGCAATCATCTTCAAAAATGCATTGAAGCAAGGAAAAACAACGATTGGGACGCAATACTGAAGGAAACGCAGTCTGCTATATCATTAGGTGCTGATTCAAGTCCTCAGGTTTATGCGTTGCAAACAGAAGCCTTACTTAAGCTCTTCAGACATCAAGAGGCATATGCTACCTACGAGAAAATGCCCAAATTGGCTATTAATTGGTGCACCAAGTTATTTGGTCTGGCTCGTACTGCTTATCTGTTTATGATAGGCACGCAGGCTTACTTGGCAGGAGGCAGGTTTGAGGATGCGGTGACAGCGGCTGAGCAAGCAGCTAAACTTGATCCAAGCGACAAAGAGGTGAGTGCAGTGGTAAAGAGGGCCAGAGCAATGTCATCAGCCAGAATAACTGGAAACTTACTGTTCAAGGCATCCAAATATACAGAAGCATGTGCAGTATACAACGAAGGACTAGAGCACGATCCATACAATTCAGTTCTCCTGTGCAACAGAGCAGCATGTCGTTCTAAGCTGGGCCAATTTGAGAAAGCGATTGAAGATTGTAATGCGGCCCTTGCAGTTCAGCCTAGTTATAGCAAGGCACGGTTAAGGAGGGCAAATTGCAATTCCAAGTTGGAAAGATGGGAAGCTGCAATTCAAGACTATGAAATGCTATTGAGAGAAAAGCCGGGGGATGAGGAGGTGGGCAGGGCTCTGTTTGAGGCTCAGCTTCAACTCAAGATGCTGCGTGGGGAAGATGTTAAGGACTTCAAATTTGGTTGTAATCTGGTTTTTGTATCGAGCAACGATCGGTTTCGACATTATATAACCTCACCTGGTATGTCTGTGGTGCTGTTCTGCAACAAGGCAACCCACAAGCAAGTATTGCTAGTGTTGGAGCAAACCTGCAAGAGATTTCCGTCTGTTAATTTCCTCAAGGTGGAAATTGAAGACCACCCCTACATAGCGAAATCAGAAGGCGTGAGCTCTGTGCCAGCATTCAAAATATACAAGAATGGATCAAAGGTTGAGGAAATTCCAGGCAACAATCACGAGTTGTTAGAAAGATCGGTTAAATTGTATAGCAGCTGA | 2055 | 0.4545 | MVGKAKNKMENEVGCGFIGKIFHLAGFKLRKSSVHSLPMKASNNVQNEQNKTESEKPPNPESRDTSTESHKPARKSPSDHRTPPTIRKNQNPRPSDAARSSTSSRNSSQTTIQQKPKLSHDSRTQRQPTENSLELARVSTHYQRENENKSPLKLTGNLLANNSPRTRTRSRESVPKNKDVMNSARKSHTHASIGVTGNIMRKSTDELAQLWSPKNRVDPEVLKTMGNEAYKQGRFEEALSLYERAIAVDSNKATFHCNKSAALIGLGRLLEAIVECQEAIRLEPSYNRPHHRLATIYLRLGEAEKALSYNVATPYSDSALAFQAQSLRNHLQKCIEARKNNDWDAILKETQSAISLGADSSPQVYALQTEALLKLFRHQEAYATYEKMPKLAINWCTKLFGLARTAYLFMIGTQAYLAGGRFEDAVTAAEQAAKLDPSDKEVSAVVKRARAMSSARITGNLLFKASKYTEACAVYNEGLEHDPYNSVLLCNRAACRSKLGQFEKAIEDCNAALAVQPSYSKARLRRANCNSKLERWEAAIQDYEMLLREKPGDEEVGRALFEAQLQLKMLRGEDVKDFKFGCNLVFVSSNDRFRHYITSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYIAKSEGVSSVPAFKIYKNGSKVEEIPGNNHELLERSVKLYSS | 684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 38 | 53 | - | - | |
| Lele04g0383 | 684 | Pfam | Tetratricopeptide repeat | 488 | 519 | IPR001440 | GO:0005515 | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 149 | 168 | - | - | |
| Lele04g0383 | 684 | CDD | TRX_family | 593 | 671 | - | - | |
| Lele04g0383 | 684 | Pfam | Tetratricopeptide repeat | 415 | 486 | - | - | |
| Lele04g0383 | 684 | SUPERFAMILY | TPR-like | 219 | 441 | IPR011990 | GO:0005515 | |
| Lele04g0383 | 684 | Pfam | TPR repeat | 226 | 261 | - | - | |
| Lele04g0383 | 684 | Gene3D | Glutaredoxin | 582 | 683 | - | - | |
| Lele04g0383 | 684 | SUPERFAMILY | TPR-like | 458 | 568 | IPR011990 | GO:0005515 | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 83 | 118 | - | - | |
| Lele04g0383 | 684 | PANTHER | TPR REPEAT-CONTAINING THIOREDOXIN | 8 | 680 | IPR044534 | - | |
| Lele04g0383 | 684 | ProSiteProfiles | TPR repeat profile. | 219 | 252 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | Pfam | Thioredoxin | 614 | 675 | IPR013766 | - | |
| Lele04g0383 | 684 | ProSiteProfiles | TPR repeat profile. | 406 | 439 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SUPERFAMILY | Thioredoxin-like | 585 | 670 | IPR036249 | - | |
| Lele04g0383 | 684 | SMART | tpr_5 | 520 | 553 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SMART | tpr_5 | 405 | 439 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SMART | tpr_5 | 253 | 286 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SMART | tpr_5 | 486 | 519 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SMART | tpr_5 | 452 | 485 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | SMART | tpr_5 | 219 | 252 | IPR019734 | GO:0005515 | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 38 | 189 | - | - | |
| Lele04g0383 | 684 | Coils | Coil | 526 | 546 | - | - | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 54 | 82 | - | - | |
| Lele04g0383 | 684 | MobiDBLite | consensus disorder prediction | 169 | 185 | - | - | |
| Lele04g0383 | 684 | Gene3D | Tetratricopeptide repeat domain | 217 | 571 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele04g0383 | Lele-ChrLele04 | 2292120 | 2294888 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele25g0333 | 25 | 2015570 | 2028159 | Lele04g0383 | 04 | 2292120 | 2294888 | CCT | |
| Lele04g0383 | 04 | 2292120 | 2294888 | Lele04g0383 | 04 | 2292120 | 2294888 | ECH | |
| Lele01g0379 | 01 | 2221318 | 2224135 | Lele04g0383 | 04 | 2292120 | 2294888 | hybridization | |
| Lele02g0376 | 02 | 2192636 | 2195412 | Lele04g0383 | 04 | 2292120 | 2294888 | hybridization |