Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1711 ATGGCGCTTCGTCTGTGTCCAAGTTTCAGCCATCCTCTGATTGCTTCCGGCTTTTCCGTCAAAACCACTCGCCAAATCCGCAGGTGTTCGATTCGGAGCTGTTTCCTGGAACCCAACGAGTCACGTAAGCTAGTGCTGGAAGTAAAGGAGAAGCTTGAGAAAGAATACCCCAGCCTCCCTGTAGGTAGAAATGGAAGAGATGACGAGGATATGATATTTTGGTTTCTGAAAGATCGCAGGTTTTCTGTTGAAGAAGCTATTTCGAAGTTGACCAAAGCCATTAAATGGCGTCAAGAATTTGGGGTATCTGCATTGTCTGAAGAAGCTGTTAAAGCCGTAGCTCAAACTGGAAAAGCATACGTGCATGACTTTCCTGACGTTGATGGAAGACCTGTGCTTGTGGTGGTGGGATCAAAGCATGTTCCCTTAGCATTTGATCCTTCAGATGATGAGAAGCTTTGTGTCTTCTTAATTGAGATGGCATTGAGTAGGCTTCCACCTGGTAAAGAGCAAATACTTGGAATAGTTGACCTCAGGGGTTTCAGAACAGAGAATGCAGATCTGAAATTCTTGACCTTCTTGTTTGATGTATTTTATTACTACTATCCGAAGCGAGTGGCCCAAGTACTATTTGTGGATGCTCCTTTCGTGTTTAAGCCAATTTGGCAAATGGTCAAGCCCTTGTTAAAATCATATGCTTCTCTGGTGGAATTTTGCCCTGCTGAGACTCTCAGGAAGGAATATTTTACACCAGAAACACTCCCCGCCAGCTTCAGAGATTGA 783 0.4432 MALRLCPSFSHPLIASGFSVKTTRQIRRCSIRSCFLEPNESRKLVLEVKEKLEKEYPSLPVGRNGRDDEDMIFWFLKDRRFSVEEAISKLTKAIKWRQEFGVSALSEEAVKAVAQTGKAYVHDFPDVDGRPVLVVVGSKHVPLAFDPSDDEKLCVFLIEMALSRLPPGKEQILGIVDLRGFRTENADLKFLTFLFDVFYYYYPKRVAQVLFVDAPFVFKPIWQMVKPLLKSYASLVEFCPAETLRKEYFTPETLPASFRD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1711 260 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 109 260 IPR001251 -
Lele24g1711 260 Pfam CRAL/TRIO domain 115 258 IPR001251 -
Lele24g1711 260 SMART sec14_4 113 253 IPR001251 -
Lele24g1711 260 SUPERFAMILY CRAL/TRIO N-terminal domain 39 108 IPR036273 -
Lele24g1711 260 SUPERFAMILY CRAL/TRIO domain 108 248 IPR036865 -
Lele24g1711 260 CDD SEC14 111 258 IPR001251 -
Lele24g1711 260 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 20 260 - -
Lele24g1711 260 Gene3D - 24 259 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1711 Lele-ChrLele24 22417808 22420664 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1711 24 22417808 22420664 Lele17g1066 17 21187144 21190000 CCT
Lele24g1711 24 22417808 22420664 Lele18g0475 18 2783042 2786008 CCT
Lele24g1711 24 22417808 22420664 Lele19g0494 19 2808340 2811216 CCT
Lele24g1711 24 22417808 22420664 Lele20g0961 20 15709522 15712818 CCT
Lele24g1711 24 22417808 22420664 Lele24g1711 24 22417808 22420664 ECH
Lele22g1746 22 22765429 22768451 Lele24g1711 24 22417808 22420664 hybridization