Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0475 ATGGCGTGGGAAGCACAAATTCAAGACCACTGTTTCAGGACAAATCATAGTAATGAACCATTTCTTTCAGGTCATCAACAAAAACACCGCACAAGAAGAAGACGACAAGGCCAATGCATACAAGAAAATCATGTTGCCTCACAACAAACAAGCCCACAGGATCATTCTCTGAAATTGGCTTCTTCTTCTTCTTCCTCCTCTTCTTCTACAAGCCTACCTCTGTTTTCTGCTGCTTCTGTTGCTTTCCTTCTGCTTCTTTCTTTTATCGCTCCTGTTCTGTCTCATTCTTCACCAACCAATCAAACTTTCCGCCCTGGTCCTGAGTTGGTCAAGCTCAGGAGAATCAGAGCTCTCCTTAAGAAAATCAACAAGCCTTCTGTCAAGACAAATAAGAGCCCTGATGGGGATTTGATAGATTGTGTTTTATCGCATCATCAGCCAGCTTTTGACCATCCTGAGCTTAAAGGGAAGAAGCCATTGGATCCACCAGAAAGGCCAAAGGGCCACAAAGAAATTGGAGAAGAAGATGTGATCGAGAGCTTTCAGCTATGGACTGATTCTGGGGAAACATGCCCAGAAGGAACAGTTCCTATCAGAAGAACAACAGAACAAGACATCCTTAGAGCAAGCTCCATTCGTAGGTTCGGAACAAAACCAAGAAGCGTACGAAGAGACTCAACTGGCTCTGGTCATGAGCATGCAGTGGTTTTTGTGAACGGAGATCAATATTATGGAGCAAAAGCGGGCATCAACGTGTGGACACCCAAAGTGAGCCCAGAACTATATGGGGACAACTATCCGAGATTCTTCACTTATTGGACAACAGATGCATATCAAGCCACTGGATGTTACAACTTGCTGTGTTCTGGTTTTGTGCAAACCAACAATAGAATAGCCATTGGAGCAGCGATTTCTCCGAGATCAGCTTACAATGGAAGACAATTTGATATTGGCTTAATGGTCTGGAAGGATCCGAAACACGGGCACTGGTGGCTGGAGTTCGGGTCGGGTCTGCTTGTTGGGTACTGGCCGGCGTACTTGTTCAGTCACCTGAGAAGCCACGCGAGCATGGTGCAATTCGGAGGAGAGATAGTGAACACGCGATCGAGAGGGTATCACACAGGCACTCAGATGGGAAGCGGGCATTTCGCCGGAGAAGGCTTCAGAAAAGCCGCTTATTTCAGGAACTTGCAGGTCGTCGATTGGGATAACAATTTGCTTCCGCTCACCAACATTCACCAGCTCGCCGATCATTCCAATTGCTACGATATCAGACAGGGCCGAAACAATGTTTGGGGCACTTATTTCTATTACGGCGGCCCCGGTAGAAATATCCGATGCCCCTGA 1347 0.467 MAWEAQIQDHCFRTNHSNEPFLSGHQQKHRTRRRRQGQCIQENHVASQQTSPQDHSLKLASSSSSSSSSTSLPLFSAASVAFLLLLSFIAPVLSHSSPTNQTFRPGPELVKLRRIRALLKKINKPSVKTNKSPDGDLIDCVLSHHQPAFDHPELKGKKPLDPPERPKGHKEIGEEDVIESFQLWTDSGETCPEGTVPIRRTTEQDILRASSIRRFGTKPRSVRRDSTGSGHEHAVVFVNGDQYYGAKAGINVWTPKVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSAYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRSHASMVQFGGEIVNTRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLTNIHQLADHSNCYDIRQGRNNVWGTYFYYGGPGRNIRCP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0475 448 MobiDBLite consensus disorder prediction 40 63 - -
Lele18g0475 448 MobiDBLite consensus disorder prediction 148 172 - -
Lele18g0475 448 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 115 444 - -
Lele18g0475 448 Pfam Neprosin activation peptide 131 236 IPR025521 -
Lele18g0475 448 Pfam Neprosin 256 441 IPR004314 -
Lele18g0475 448 Gene3D - 232 335 - -
Lele18g0475 448 MobiDBLite consensus disorder prediction 14 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0475 Lele-ChrLele18 2783042 2786008 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1746 22 22765429 22768451 Lele18g0475 18 2783042 2786008 CCT
Lele23g0238 23 1637676 1638329 Lele18g0475 18 2783042 2786008 CCT
Lele24g1711 24 22417808 22420664 Lele18g0475 18 2783042 2786008 CCT
Lele18g0475 18 2783042 2786008 Lele19g0494 19 2808340 2811216 hybridization
Lele18g0475 18 2783042 2786008 Lele20g0961 20 15709522 15712818 hybridization