Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0961 ATGGATATGAAGGGATATTCAGGTTTCAGGACAAATCATAGTAATGAACCATTTCTTTCAGGTCATCAACAACACCGCAGAAGAAGAAGACGACAAGGCCAATGCATACAAGAAAATCATGTTGCCTCACAACAAACAAGCCCACCGGATAATTCTCTGAAATTGGCTTCTTCTTCTTCTTCTTCGTTCTCCTCTTCTTCTACAAGCCTACCTCTGTTTTCTGCTGCTTTTGTTGCTTTCCTTCTGCTTCTTTCTTTTATCGCTCCTGTTCTGTCTCATTCTTCACCAACCAATCAAACCTTCCGACCTGGTCCTGAGTTGGTCAAGCTCAGGAGAATCAGAGCTCTCCTTAAGAAAATCAACAAGCCTTCTGTCAAGACAAATAAGAGCCCTGATGGGGATTTGATAGATTGTGTTTTATCGCATCATCAGCCAGCTTTTGACCATCCTGAGCTTAAAGGGAAGAAGCCATTGGATCCACCAGAAAGGCCAAAGGGCCACGAAGACAATGGAGAAGAAGATGTGATCGAGAGCTTTCAGCTATGGACTGATTCTGGCGAAACATGCCCAGAAGGAACAGTTCCTATCAGAAGAACAACAGAACAAGACATCCTAAGGGCAAGTTCCATTCGTAGGTTCGGAAGAAAACCAAGAAGCGTACGAAGAGACTCAACTGGCTCTGGTCATGAGCATGCAGTGGTTTTTGTTAACGGAGATCAATATTATGGAGCAAAAGCGGGCATCAACGTGTGGACACCCAAAGTAACCGATCAATACGAATTCAGCTTATCACAAATATGGGTCATTGCAGGCTCTTTTGGTCATGATTTGAACACCATCGAAGCTGGTTGGCAGGTGAGCCCAGAACTATATGGGGACAACTATCCGAGGTTCTTCACTTATTGGACAACAGATGCATATCAAGCCACTGGATGTTACAACTTGCTGTGTTCTGGTTTTGTGCAAACCAACAATAGAATAGCCATTGGAGCAGCGATTTCTCCGAGATCAGCTTACAATGGAAGACAATTTGATATTGGCTTAATGGTCTGGAAGGATCCGAAACACGGGCACTGGTGGCTCGAGTTCGGGTCGGGTCTTCTGGTGGGGTACTGGCCGGCGTACTTGTTCAGTCACCTGAGAAGCCACGCAAGCATGGTGCAATTCGGAGGAGAGATAGTGAACACGCGATCGAGAGGGTATCACACCGGCACTCAGATGGGAAGCGGGCATTTCGCCGGAGAAGGCTTCAGAAAAGCCGCTTATTTCAGGAACTTGCAGGTCGTCGATTGGGATAACAATTTGCTTCCGCTCACCAACATTCACCAGCTCGCCGATCATTCCAATTGCTACGATATCAGACAGGGCCGTAACAATGTTTGGGGCACTTATTTCTATTACGGCGGCCCCGGTAGAAATATCCGATGCCCCTGA 1434 0.4644 MDMKGYSGFRTNHSNEPFLSGHQQHRRRRRRQGQCIQENHVASQQTSPPDNSLKLASSSSSSFSSSSTSLPLFSAAFVAFLLLLSFIAPVLSHSSPTNQTFRPGPELVKLRRIRALLKKINKPSVKTNKSPDGDLIDCVLSHHQPAFDHPELKGKKPLDPPERPKGHEDNGEEDVIESFQLWTDSGETCPEGTVPIRRTTEQDILRASSIRRFGRKPRSVRRDSTGSGHEHAVVFVNGDQYYGAKAGINVWTPKVTDQYEFSLSQIWVIAGSFGHDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSAYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRSHASMVQFGGEIVNTRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLTNIHQLADHSNCYDIRQGRNNVWGTYFYYGGPGRNIRCP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0961 477 Pfam Neprosin activation peptide 129 234 IPR025521 -
Lele20g0961 477 Gene3D - 252 364 - -
Lele20g0961 477 MobiDBLite consensus disorder prediction 1 60 - -
Lele20g0961 477 MobiDBLite consensus disorder prediction 36 60 - -
Lele20g0961 477 FunFam Putative carboxyl-terminal proteinase 250 369 - -
Lele20g0961 477 MobiDBLite consensus disorder prediction 146 171 - -
Lele20g0961 477 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 113 473 - -
Lele20g0961 477 Pfam Neprosin 259 470 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0961 Lele-ChrLele20 15709522 15712818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1746 22 22765429 22768451 Lele20g0961 20 15709522 15712818 CCT
Lele23g0238 23 1637676 1638329 Lele20g0961 20 15709522 15712818 CCT
Lele24g1711 24 22417808 22420664 Lele20g0961 20 15709522 15712818 CCT
Lele17g1066 17 21187144 21190000 Lele20g0961 20 15709522 15712818 hybridization
Lele18g0475 18 2783042 2786008 Lele20g0961 20 15709522 15712818 hybridization