Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1710 ATGAGTGATATAGGATCAGGAAGAAGAAAAAGAAGAAGACGATCGAGAAATCAAAACGAGCTCCTCGCTCCTTCATCTTCAGATTTCCAATTCCAGCCATTTCAGCCGTCGGCGGCGGTAGTTCCGGAGGATCAGCCGGCCTTTCTGGAGGGTTTTGAGCTTCAATACGGCACCGTCCATCCTTTCTTCTACGCGTGCCGTTTAATGGAAGTTCTGAAACTTGCAGAGCAAGACAAGAAGTTGGTGTTCATGTACATCCATTCTCCAGAACACCCTCTCACTCACAGCTTTTGCAGGGAAACACTCTGTAGTGAGCTCGTGACCGAATTCCTTGACGTTACCTTCATTTGCTGGGGAGGCCTCGCTGATCGAGGCGAAGGTCTGAGTATGGTCGCCAATCTCCTCCCTGCTAGCTTCCCCCTTTGCGCCATGGCGGTTCTGCAACTGGTGGAAGGACCAGTTTCAGCGGCGGAGCTAGGAAAAAGAAAACCTCAGGAATTCAACTTCAACAGAAAGAGTTCATCAGAAACCAGTACAAGCATTGAACACACACCAGAAATTATGAGAAGCCTAATAAGAACAAATCTGCGAGTAAACACAACTCTAAAGTGCATGACCCCACCACCGCCACGCAAAATCAAAACAAAGGAGTTCCAAATCGGGCAGGCCAGTGTCAACCCACTCAGGTTTCCAAACGGGGAAAGAAGAGAGCATAGATTTGAAAGTAAGGACAGAATTCAGGCAATTTTCGCATTCATTGATTCACTTGGCATGCCTGGGATTGGGAACTACAAATTGGTGTCAAACTTCCCAAGAAGAGTGTATGGCGTTGATCAGAAGATAATGACACTCGAAGCCGCTGGCCTCCATCCCAAAGCGAGCATTTTCCTCGAGCCCGGGTCCACCGACCCATAA 915 0.4842 MSDIGSGRRKRRRRSRNQNELLAPSSSDFQFQPFQPSAAVVPEDQPAFLEGFELQYGTVHPFFYACRLMEVLKLAEQDKKLVFMYIHSPEHPLTHSFCRETLCSELVTEFLDVTFICWGGLADRGEGLSMVANLLPASFPLCAMAVLQLVEGPVSAAELGKRKPQEFNFNRKSSSETSTSIEHTPEIMRSLIRTNLRVNTTLKCMTPPPPRKIKTKEFQIGQASVNPLRFPNGERREHRFESKDRIQAIFAFIDSLGMPGIGNYKLVSNFPRRVYGVDQKIMTLEAAGLHPKASIFLEPGSTDP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1710 304 Gene3D Glutaredoxin 37 171 - -
Lele24g1710 304 SUPERFAMILY Ubiquitin-like 228 299 IPR029071 -
Lele24g1710 304 PANTHER FAS-ASSOCIATED PROTEIN 178 298 - -
Lele24g1710 304 SMART 45neu3 47 164 IPR006577 -
Lele24g1710 304 CDD UBX 228 298 - -
Lele24g1710 304 Gene3D - 227 302 - -
Lele24g1710 304 MobiDBLite consensus disorder prediction 1 20 - -
Lele24g1710 304 Pfam UBX domain 228 298 IPR001012 GO:0005515
Lele24g1710 304 SUPERFAMILY Thioredoxin-like 46 144 IPR036249 -
Lele24g1710 304 SMART ubx_3 214 299 IPR001012 GO:0005515
Lele24g1710 304 ProSiteProfiles UBX domain profile. 228 297 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1710 Lele-ChrLele24 22415833 22417221 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1710 24 22415833 22417221 Lele17g1069 17 21205068 21207740 CCT
Lele24g1710 24 22415833 22417221 Lele18g0472 18 2763536 2766204 CCT
Lele24g1710 24 22415833 22417221 Lele19g0491 19 2790514 2793162 CCT
Lele24g1710 24 22415833 22417221 Lele20g0964 20 15729483 15732181 CCT
Lele24g1710 24 22415833 22417221 Lele24g1710 24 22415833 22417221 ECH
Lele21g1769 21 25403485 25407645 Lele24g1710 24 22415833 22417221 hybridization
Lele22g1745 22 22763168 22763857 Lele24g1710 24 22415833 22417221 hybridization